Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7966 |
Symbol | |
ID | 8339344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9242230 |
End bp | 9243693 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961051 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003118630 |
Protein GI | 256397066 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACTG CGTCCATATC CACAACGCCT TCCACCGGGA AAGTTGTTCC GAAGCGCGAG CCCAAGCCGG GGCTCATTCT TGCCACCATC GTGACCTGCC AGCTGATGCT GGTCCTCGAC GCCACCATCG TCAACATAGC CCTGCCGAAG ATCCAGACGT CGCTGAAGTT CTCTGACGCG AACCTGTCGT GGGTGCTCAA CGCCTATACC TTGGCCTTCG GCGGTCTGCT GCTGCTCGGC GGGCGTGCCG GGGACATTTT GGGGCGGCGG CGGATGTTCG TCTCCGGGGT CATCCTTTTC ACTGTCGCGT CCTTCATCGG CGGGCTGGCG GTCGACTCCA CCATGCTGCT GGCTTCGCGG GCGTTGCAGG GTGTGGGGGC GGCGATGGCC GGTCCCAGCA TGCTGGCACT GATCATCACG ACCTTCCCCG AGGGGGCGCC GCGGGTGAAG GCGATGAGCC TGTTCACCGC GGTCTCCAGC GCGGGCGGCT CGGTGGGCCT GCTGCTCGGC GGGATGCTGA CCACGTGGGG TTCGTGGCGG CTGGTCATGT ACATCAACGT GCCGATCGGT GCGGTGGCGG CCATCGCCGC GGCGCGGCTG CTGAACGAGT CGCCGCGGGT GCAGGGCAAA TTCGACATTC CCGGGGCGAT CACCTCGGTG ACCGGTATGG GCAGCCTGGT CTACGGGTTC ATCAATGCCT CTGAGCACGG CTGGAGCAAC CCGACCACGA TCGGCGTGTT CGTCGCGGCG GTGGTGCTGC TGAGCTCGTT CGTGTTCATC GAGTCGCGCG TGGACTTCCC GGTGTTCCCG CTGCGTCTGC TGCGGGACAG CACTCGGGCC CGCAGCTACG GCTCCTATGT GCTGCTGGTC GGCGCGATGT TCTCCATGTT CTTCTTCTTG CCGCAGTTCA TGCAGGAGGT GCTGGCCTAC TCGCCGATGA AGGCGGGTCT GGCGTTCCTG CCGCTGACGG CGACGCTGTT CGCGGTCTCG CGCTTCATTC CCAAGCTGCT GCCGCGCTTC GGGCCGCGTC CGCTGATCGT CACGGGTACG GCGCTGATCG CCGGGGCGCT GTTCTGGCTG TCGCAGGTCT CGATCCACAC CGGCTTCGTC ACCGGTCTGC TGGCGCCGTT CCTGATGTTC GGGCTCGGCG GCGGTATCGC GTTCAGCCCG ATCGCGCTGA ACATCATGAA CGGTCTGGCG CCTCGGGACT CCGGTGCGGG CTCGGGTCTG ATGCAGGCCT GTCAGCAGAT CGGCGGCGCG CTGGGCATCG CGGTGCTGGT GACCATCTTC ACCTCGTCGA AGAAGGGGAG CCACGACCCG AACCCGGCGG TGAACTTCAC GCACGGGCTG GGGACCGGTC TGACGGTCGG GGCGGGGATC GCGGTGGCGG TGTGCCTGAT CTCGCTGACG CTGAAGCCGA AGCCGGCGGC GCCGTCCGCG GGTCCGGCTC CGGTGCTGGA GTAG
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Protein sequence | MSTASISTTP STGKVVPKRE PKPGLILATI VTCQLMLVLD ATIVNIALPK IQTSLKFSDA NLSWVLNAYT LAFGGLLLLG GRAGDILGRR RMFVSGVILF TVASFIGGLA VDSTMLLASR ALQGVGAAMA GPSMLALIIT TFPEGAPRVK AMSLFTAVSS AGGSVGLLLG GMLTTWGSWR LVMYINVPIG AVAAIAAARL LNESPRVQGK FDIPGAITSV TGMGSLVYGF INASEHGWSN PTTIGVFVAA VVLLSSFVFI ESRVDFPVFP LRLLRDSTRA RSYGSYVLLV GAMFSMFFFL PQFMQEVLAY SPMKAGLAFL PLTATLFAVS RFIPKLLPRF GPRPLIVTGT ALIAGALFWL SQVSIHTGFV TGLLAPFLMF GLGGGIAFSP IALNIMNGLA PRDSGAGSGL MQACQQIGGA LGIAVLVTIF TSSKKGSHDP NPAVNFTHGL GTGLTVGAGI AVAVCLISLT LKPKPAAPSA GPAPVLE
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