| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7965 |
|---|
| Symbol | |
|---|
| ID | 8339343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9241511 |
|---|
| End bp | 9242089 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644961050 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003118629 |
|---|
| Protein GI | 256397065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGCAG ACGCGCTCCG CAACCGCGAG CGCCTCGTAG AGGTCGCCCA GTCGGCATTC
GCCACCAACG GCATCGAGAC CTCCCTGGAA GAAATCGCCC GCCAAGCCGG CGTAGGCATC
GGCACCCTCT ACCGCCGCTT CCCCCGCCGA GAGGACCTCA TCGCCGCCGT CCTGGCCGAG
CGCTACCTAA AACTCACCGA GTGCGCCCAA GTCCTCGCCG AACACCGCCA AGACGCCGAC
ACCGCCCTCA CCGAATGGCT GACCCTCCTC ATCGAGCACA TGGCCATCTA CCGAGGCCTC
TCCCTCGCAG TAAAAGAAGC CATCCACGAC CAAACCACAG CCCTAGGCCG CACCTGCAAA
CAAATGATGG ACGCCGGCGC CGCCCTCCTC CACCAAGGCC AACAAACCGG AGCCTTCCGC
CCCGACATCA CCTTCTACGA CGTCATGGCC CTCTCCTCCG GCATCGTCAC CGCCGTAGAA
CGCCGCGCCG AAAAGCCCAA CGACACCGAC ATCCCCCCAG TCAACCCCTA CCTCCTCCTC
GACGTGGTCC TCCGAGGCCT CCGCACCCCA GCCGCGTGA
|
|---|
| Protein sequence | MRADALRNRE RLVEVAQSAF ATNGIETSLE EIARQAGVGI GTLYRRFPRR EDLIAAVLAE
RYLKLTECAQ VLAEHRQDAD TALTEWLTLL IEHMAIYRGL SLAVKEAIHD QTTALGRTCK
QMMDAGAALL HQGQQTGAFR PDITFYDVMA LSSGIVTAVE RRAEKPNDTD IPPVNPYLLL
DVVLRGLRTP AA
|
|---|
| |