Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7962 |
Symbol | |
ID | 8339340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9238686 |
End bp | 9239783 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961047 |
Product | aminotransferase class I and II |
Protein accession | YP_003118626 |
Protein GI | 256397062 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAAGC TCCCTGACTT CCCGTGGGAC CGGCTCGCGC CCGCCAAGGC GCGAGCCGGC CAGCACCCGG ACGGAATCGT CGACCTCTCC GTCGGCACCC CAGTCGACCC GGTGCCGGCG GTCGTGCAAG ACGCCCTACG GACCGGGTCC AACGCGCCCG GCTACCCACT GACCCACGGC ACCCCCGCCC TGCGCGAGGC TGCCGTCGGG TGGATGGCAC GCCGGCTCGG CGTGTCCGGC GTCGCCCCGG CAGCCGTGCT GCCGGTACTT GGCACCAAGG AGCTGGTGGC CTGGCTCCCG ATGCTGCTCG GGCTCGGCCC GGGGGACCAG GTGGTCATCC CGGCGGTGGC CTATCCGACC TACGACGTCG GCGCGCGCAT CGCCGGCGCC GACACGCTGG TCGCCGCGCC GGAGGACGCC GCGGAGCTGA TCGGCGCGCG CCGCCCGAAG CTGCTCTGGC TCAACTCCCC GGCGAATCCC AACGGGCGGG TCGCCTCGGC CGCCGAGCTG CGCGCGGTGG TCGCTGCGGC CCGCGAGGCG GGGACCGTCG TGGTCTCCGA CGAGTGCTAC ATCGAGCTGG CCTGGGAGGC CGAGCCGGTC TCGCTGCTGC ACCCGGACGT CTGCGGCGGC AGCCACGAGG GACTGCTCGT GGTGCACTCG CTGTCCAAGC GCTCGAACCT GGCTGGCTAC CGCGCCGGCT TCGTCACCGG CGACCCGGCG ATCGTGGCCG ACCTGCTGGA GGTGCGCAAG CACGCCGGCA TGATCATGCC GCAGCCGGTG CAGGATGCGA TGGCGGCCGC CCTGAATGAC GACGCGCACG CTGCGGAGCA GAAGGAGCGC TACCGCAAGC GGCGTGAGGT TCTGCGCGGG GCGCTGGAGC ATGCGGGCTT CCGCATCGAG CACTCCGAGG CCGGGCTGTA CTTGTGGTCC ACGCGCGACG AGGACTGCTG GACCACGGTC GACTGGCTCT CCGAGCGCGG CATCTTGGTG GCTCCTGGCG ACTTCTACGG CGAGGCTGGG GCGCGGCATG TGCGGGTCGC GCTGACTGCG AGTGATGAGC GGGTCGCGGC TGCGGCTGCG CGGTTGATCG GGTCCTGA
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Protein sequence | MRKLPDFPWD RLAPAKARAG QHPDGIVDLS VGTPVDPVPA VVQDALRTGS NAPGYPLTHG TPALREAAVG WMARRLGVSG VAPAAVLPVL GTKELVAWLP MLLGLGPGDQ VVIPAVAYPT YDVGARIAGA DTLVAAPEDA AELIGARRPK LLWLNSPANP NGRVASAAEL RAVVAAAREA GTVVVSDECY IELAWEAEPV SLLHPDVCGG SHEGLLVVHS LSKRSNLAGY RAGFVTGDPA IVADLLEVRK HAGMIMPQPV QDAMAAALND DAHAAEQKER YRKRREVLRG ALEHAGFRIE HSEAGLYLWS TRDEDCWTTV DWLSERGILV APGDFYGEAG ARHVRVALTA SDERVAAAAA RLIGS
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