| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7956 |
|---|
| Symbol | |
|---|
| ID | 8339334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9229137 |
|---|
| End bp | 9230213 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003118620 |
|---|
| Protein GI | 256397056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0599296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTCT CGAGTCAGGT GCCGCAGGGC GCCGAGCACG GGTCGGCCCC GGTCTTCTTC
CTCAGTTATG CCCGCCACCA CCGCGCCCCA GAGGACAAGT CGGGAACGGC CGAGGATCCG
GATCGCTGGA CCCTGCGCTT CTTCGACGAC CTGACCTTCG AGGTCGCGGA GTTGACCACG
CTGCCCCGCC ACGCGCGCCC CGGGTTCATG GACCGGGAGC TGCGGGTCGG GCAGGAATGG
CCGCGCCGGA TATCGGAGGC GCTGGCGGCC TGCCGGGTGT TCGTGCCGCT CTACACACCG
CGCTACTTCA CATCCCTGAG CTGCGCCAGC GAGTGGTACC TGTTCCAGGC GCGGCAGAGC
GCGCACGAAC TGACCTCCGG CAGCCGCTCC GAGGCGATCA TCCCGGTGCT GTGGCTGCCG
ATGCCGGACA CCGAGCTGCC GGCGGCCGCA CAAGCTCTCC AGTTCGACCA CCACACTCTC
GGCGAGGCCT ACGCGCGCCT GGGCTTCCTG CAGCTAATAC GGCTGGCCCG CTTCAAGGAC
GAGTACCAGC TGGCGATCCA TGCGCTGGCG AGGGAGGTCG TGCGGGTGGC GTTAAGCAGC
GCGCCCCAGG CGTCCTTGCC AGTGGACTTC ACGGCGGTGC GCAGCCGGTT CGAGAACGCG
GAAGGCCTCT TCGAGGCGGC CGGGGACCTG GTACGCCACG TCGGTGGACG TACGCCGCTG
TCCTTACCGG GGCGACGTCC ACTCGCGCTT CCGCCGGGAA GACCCATGGC GGAACTCTTG
GCAGGTCCGT CCGAGAGCAG CAGCCCAAGC CCGCACGACT CCGCAGACGA CGCAGTGACC
GCATACATCC GCGCCGTACA GGGGAAGCTC GCGGAGTGGT TCGCCAGCCG GCCGCACCAG
ATCGCGTCCG CAGACTTCGA CGACTTCTAC TTCCGAGAGG TGCACCCCGC CGCCAAGGCG
GCGCTGTTAC GCCATCTGAC GCCCCACGCC CCGGACGGCC GCTCCGCGCG CCCGCCCCGC
CTGCGCTCCC TACCCACCGC TGATCGACCG CCAGGAGGAG CGCCCGATGT CCCCTGA
|
|---|
| Protein sequence | MAVSSQVPQG AEHGSAPVFF LSYARHHRAP EDKSGTAEDP DRWTLRFFDD LTFEVAELTT
LPRHARPGFM DRELRVGQEW PRRISEALAA CRVFVPLYTP RYFTSLSCAS EWYLFQARQS
AHELTSGSRS EAIIPVLWLP MPDTELPAAA QALQFDHHTL GEAYARLGFL QLIRLARFKD
EYQLAIHALA REVVRVALSS APQASLPVDF TAVRSRFENA EGLFEAAGDL VRHVGGRTPL
SLPGRRPLAL PPGRPMAELL AGPSESSSPS PHDSADDAVT AYIRAVQGKL AEWFASRPHQ
IASADFDDFY FREVHPAAKA ALLRHLTPHA PDGRSARPPR LRSLPTADRP PGGAPDVP
|
|---|
| |