| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7947 |
|---|
| Symbol | |
|---|
| ID | 8339325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9219296 |
|---|
| End bp | 9220075 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644961032 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003118611 |
|---|
| Protein GI | 256397047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG GCAGCGGGAA CGGACACGGC ACCGGCAGCA GTTTCACCGA GCGCTTCGTC
GGAGCGGTGA CCCGTCGGCG GGGACAGGAG CAGTTGCCGG CGGCCACGGC CGACCAGAAG
CTGCTGGACC ATGCGTACGG CAAGGACTGG AAGGACGAGG ACCCCTGGCG GGTGCTGCGC
ATCCAGGGCG AGTTCGTCGA GGGCTTCGAC TCCTTGGCCC GCACCGGTCC GGCCATCACC
GTCTTCGGCT CGGCCCGCAC CCCGACCGGA AGCCCCGAGT ACCTGATCGG CGAGCAGATC
GGCCGCGGTC TGGCGACCGC CGGCTGGTCG GTCATCACCG GCGGCGGCCC GGGCGCCATG
GAGGCGGCGA ACAAGGGCGC CATCGACGCC GGCGGACGCT CCATCGGCCT GGGCATCGAG
CTGCCTTTTG AGCAGTCCTT GAACAGCTAC ATCGACCAGG GCATCAACTT CCGCTACTTC
TTCGTCCGCA AGACCATGTT CCTGAAGTAC TCCCAGGGCT TCGTGGTGCT GCCCGGCGGC
TTCGGGACCA TGGACGAGCT CTTCGAAGCG CTGACTCTGG TCCAGACACA CAAGGTGACG
TCGTTCCCGG TGGTCCTGGT CGGCCGCGGC TACTGGGGCG GGCTGGTGGA CTGGATCCGC
GCGTCGATGA TCCCGGCCGG CAAGATCGCC CCGGGCGACC TGGACCTGAT CCACCTCGTC
GACGACCCAG ACGAGGCGGT CGCGATCATG GGCAAGCCGG GGGAGCGTGG CCTAAGCTAG
|
|---|
| Protein sequence | MSQGSGNGHG TGSSFTERFV GAVTRRRGQE QLPAATADQK LLDHAYGKDW KDEDPWRVLR
IQGEFVEGFD SLARTGPAIT VFGSARTPTG SPEYLIGEQI GRGLATAGWS VITGGGPGAM
EAANKGAIDA GGRSIGLGIE LPFEQSLNSY IDQGINFRYF FVRKTMFLKY SQGFVVLPGG
FGTMDELFEA LTLVQTHKVT SFPVVLVGRG YWGGLVDWIR ASMIPAGKIA PGDLDLIHLV
DDPDEAVAIM GKPGERGLS
|
|---|
| |