| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7889 |
|---|
| Symbol | |
|---|
| ID | 8339265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9154368 |
|---|
| End bp | 9155129 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960972 |
|---|
| Product | protein of unknown function DUF159 |
|---|
| Protein accession | YP_003118553 |
|---|
| Protein GI | 256396989 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.332914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.451082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAC GCTACGTGCT GCGGACGGAC CCCTCGCAGC TGGCCGACCA GCTCGGCATC
GGGCAGCCGG AGATGTTCGA GCAGGTCGCC GAGACCTTCG AGCCGAACTA CAACGTGGCA
CCGACCGATC CGGTCGTGGC CGCGATCGAG CGGCACCCGC GCGACGCCGA GCCGGGCTCG
GAAGCGGTGC GCAAGCTCCG GGAGGTCCGC TGGGGACTGG TGCCCTCCTG GGCCAAGGAC
CGCAAGATCG GCCAGAAGAT GTTCAACGCG CGCATCGAGA CGGTCACCGA GAAGGCGTCC
TTCAAGCGCG CCTTCATGAA GCGCCGCTGC ATCATCCCGG CCGACGGCTA CTACGAGTGG
TACAAGCCGG CCGGTCCCAA GCCGGTCAAG CAGCCGTTCT TCATCCACGA CGCCTCCGGC
GACGCCCTGG CCTTCGCCGG GCTGTACGAG CTCTGGCGCG ACCCGGAGAT CGAGGACAAG
GAGGACCCGG CGGCCTGGCT GTGGTCGGCC ACGATCCTCA CCACCGCCTC GGTCGGCGGG
CTGCACCGCA TCCACGACCG GATGCCGGTC ATCGTCCCGC GGGCGCACTT CGACGCCTGG
CTGGACCCCG ACTACGGCTC CGGCGAGGGC GACGCCGACG CCCTGCTCGG CTTGCTGGAC
GCCGGACGCG ACCCGCACCT GGACACCTTT CCGGTCTCGC CGGCGGTGAA CTCGGTGCGG
AACAACGGAC CTGAACTGGT TGTCCCCCTC GAGGCTGAGT GA
|
|---|
| Protein sequence | MCGRYVLRTD PSQLADQLGI GQPEMFEQVA ETFEPNYNVA PTDPVVAAIE RHPRDAEPGS
EAVRKLREVR WGLVPSWAKD RKIGQKMFNA RIETVTEKAS FKRAFMKRRC IIPADGYYEW
YKPAGPKPVK QPFFIHDASG DALAFAGLYE LWRDPEIEDK EDPAAWLWSA TILTTASVGG
LHRIHDRMPV IVPRAHFDAW LDPDYGSGEG DADALLGLLD AGRDPHLDTF PVSPAVNSVR
NNGPELVVPL EAE
|
|---|
| |