| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7860 |
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| Symbol | thyX |
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| ID | 8339236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9118351 |
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| End bp | 9119058 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644960943 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_003118524 |
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| Protein GI | 256396960 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0403758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTTCC GGTCGGACAT GACCGTGGAG TTGGTGAAGG CCTCGGCCGC GGACAGCGAT
GTGCTGTGGG CGGCCCGGGT CTCGACCCAG GGCGAGCAGT CGCTCGACGA GGCCGGCGCC
GACCCGGCCC GCTCCGGCGG CCTCATCAAC TTCCTCATGC GCGACCGGCA CGGCTCGCCG
TTCGAGCACT CCACGATGAC CTTCCTGGTC TCCGCGCCGA TCTTCGTCTT CCGCGAGTTC
ATGCGGCACC GGGTCTGGTC CTACAACGAG GAGAGCGGCC GCTACCGCAA GCTGGAGCCG
GTGTTCTATG TCCCGGGTCC GGACCGCAAG CTCGTGCAGG AAGGCAAGCC CGGCAAGTAC
GTCTTCGTCT CGGGCACCGA GGAGCAGCAC AAGACGGCCG AGGAGACAGT CCGCCGTTCC
TGTGAGGCCA GCTACGCCGC CTATCTGGAG ATGCTCGACG CCGGTATCGC CCGCGAGGTG
GCCCGCAGCG TGCTCCCGGT CGGCATCTAC TCCTCGATGT ACGCCACCTG CAACGCCCGC
GCGCTGATGC ATTTCCTGTC GCTGCGGACC AAGCACGAGG AGGCGACGTT CCCGTCCTTC
CCGCAGCGCG AGATCGAGAT GGTCGCGGAG AAGATGGAGG CGTACTTCGC CGAGCTGATG
CCGCTGACGT ACGCGGCGTG GGAGGCGAAC GGACGCGTCG CGCCGTAG
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| Protein sequence | MRFRSDMTVE LVKASAADSD VLWAARVSTQ GEQSLDEAGA DPARSGGLIN FLMRDRHGSP
FEHSTMTFLV SAPIFVFREF MRHRVWSYNE ESGRYRKLEP VFYVPGPDRK LVQEGKPGKY
VFVSGTEEQH KTAEETVRRS CEASYAAYLE MLDAGIAREV ARSVLPVGIY SSMYATCNAR
ALMHFLSLRT KHEEATFPSF PQREIEMVAE KMEAYFAELM PLTYAAWEAN GRVAP
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