Gene Caci_7847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7847 
Symbol 
ID8339223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9104427 
End bp9105029 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID644960931 
ProductCDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyl transferase 
Protein accessionYP_003118512 
Protein GI256396948 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.245817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCCG CCCCCCCGGA CCCGCTGACG CTGGAGGCGT CCCCGGCGGG TCTGTGGAAC 
ATGGCCAACA TCCTGACGAT GGTGCGGCTG CTGCTGGTTC CCTTCTTCGG CATCCTGCTC
GCCCACGACC ACGGCGACTC GGCGGCATGG CGCGGCATGG CGTGCGCGGT GTTCGTGGTC
GCCAACATCA CCGACACCCT GGACGGCAAG GTCGCCCGGG CCCGCAACCT GGTCACCGAC
TTCGGCAAGA TCGCCGACCC CATCGCCGAC AAGGCCCTGA TGGGCACCGC GCTGGTGATC
CTCAGCGTGC TCGGCGAGCT GAGCTGGTGG ATCACGATCG TGATACTCGT CCGCGAGCTG
GGCGTCACGC TGCTGCGGTT CTGGGTGCTG AAGTACGGCG TGATCGCCGC CAGCCAGGGT
GGCAAGCTCA AGACCTTCCT GCAGGGCTTT GCGATCCTGT TCTACCTGAT CCCGACCTCC
GCGGACTGGT GGCACTGGGT CAGCGTGGTG ACGATGGCCG CCGCGCTGGT GCTGACGGTG
GCGACCGGCG TGGACTACGT CGTGCGGGCG GTGCGGCTGC GGCTGAGCGG GGAGAAGCGG
TGA
 
Protein sequence
MKPAPPDPLT LEASPAGLWN MANILTMVRL LLVPFFGILL AHDHGDSAAW RGMACAVFVV 
ANITDTLDGK VARARNLVTD FGKIADPIAD KALMGTALVI LSVLGELSWW ITIVILVREL
GVTLLRFWVL KYGVIAASQG GKLKTFLQGF AILFYLIPTS ADWWHWVSVV TMAAALVLTV
ATGVDYVVRA VRLRLSGEKR