Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7839 |
Symbol | |
ID | 8339215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9097136 |
End bp | 9098653 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960923 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003118504 |
Protein GI | 256396940 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0757914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGC CGTCGGAGAG CGCGACGACC CCGTCCGAGG CCGCGAAGAG TGCCGCCGAG GACGCCACGT ACGGACCGCG GGTCGCCCAT GAATGGATGA TCCTCGGTGT CGTGAGCCTC GCGCAGCTGA TGGTGGTGCT GGACGCGACC GTGGTGACCA TCGCGCTGCC CTCCGCGCAG CAGGATCTGG GGTTCACCAA TGCCTCGCGG CAGTGGATCG TCACCGCGTA TGCGCTGGCG TTCGGCTCGC TGTTGCTGGT CGGGGGGCGG TTCGCGGACC TGTTCGGGCG GCGGAACGCG CTGATCGGCG GGTTGGTCGG GTTCGGGGTA GCCTCGGCGC TGGCCGGGAT CGCGCCCAAC GTGGGCATCC TGATCGGCGG TCGTGCGCTG CAGGGCCTGT TCGGCGCGTT GCTGGCGCCG GCGGCGCTGA GTGCCTTGAC CACCACCTTC ACCCGACCGG CGGAGCGGAA CCGGGCGTTC GCCGTGTACG GCGCGGTAGC CGGCGCGGGC GGCGCGATCG GGCTGTTGCT CGGCGGGCTG CTGACCGAGT ATCTGAACTG GCGCTGGACG CTGTTCGTCA ACCTGGTCAT CGCCGGGGTC GCGCTGCTCG GCGCACTGGC CTATGTCCCG AACCACCGGC CCGAGGGCCG TCCGACGCTG GACCTGCCTG GCACTGCCTA CGCCTGTTCC GGATTGTTCC TGCTGGTCTT CGGCTTCTCG CGAGCTGAAG CGAAGGGCTG GAGCTCGCCG CAGTCCTGGG TCAGCCTGAT CGTCGGCTGC GTCCTGCTCG TCCTCTTCGC CCGGTGGCAG CGCCGCGCTC CGCACCCGCT GTTGCCGCTG CGGGTGGTGG CGGAGCGCAA CCGGGGCTCG TCCTACCTGG GAATGTTCAT CACCGGCGCC GGGATCTTCG GCGTCTTCCT GTTCCTGACG TACTACATGC AGCAGATCCT CGGCTATTCG CCGGTCAAGA CCGGTCTGGC CTTCCTGCCG ATGGTCGGCG CGCTGATGGT GTCCGCGCAG ATCGCGACGA TCACCCTGCT GCCCAGAGTG GGTCCCCGGC CGGTGGTTCC GCTGGGCATG CTGTTCGGCG GGGTCGGCAT GTTGTGGCTG ACCCGGCTCG AGCTGACCAG CAGCTACGCC CCGCACATCC TGCCGCCGCT GCTGGTCCTC GGTTTCGGGA TGGGGTTGAT CTTCGCCCCG GCGATGGCCA TGGCCACCTA CGGGGTACGC GCCGACGACG CGGGCGTCGC CTCGGCGATG GTCAACACCT GTCAGCAGGT CGGCGGCTCC ATAGGCGTGG CACTGCTTTC CACGTTGGCC GCCAGCGCGG CGACGAACTA TGCCAAGGGC AAGACCGCCT CGTCGCTGGT GACCGCACAG GCCAACCTGC ACAGCTACGC CACGGCCTAC CGCTGGTCCG CCGCGTTCTT CTTCGTCGGC ATGGTCATCT GCTTCCTGCT CTATCGCTGG GGCGCGCCGA AGGGCGATCC AGAAGCGCAG GGCCCAGTCC CGATGTAG
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Protein sequence | MASPSESATT PSEAAKSAAE DATYGPRVAH EWMILGVVSL AQLMVVLDAT VVTIALPSAQ QDLGFTNASR QWIVTAYALA FGSLLLVGGR FADLFGRRNA LIGGLVGFGV ASALAGIAPN VGILIGGRAL QGLFGALLAP AALSALTTTF TRPAERNRAF AVYGAVAGAG GAIGLLLGGL LTEYLNWRWT LFVNLVIAGV ALLGALAYVP NHRPEGRPTL DLPGTAYACS GLFLLVFGFS RAEAKGWSSP QSWVSLIVGC VLLVLFARWQ RRAPHPLLPL RVVAERNRGS SYLGMFITGA GIFGVFLFLT YYMQQILGYS PVKTGLAFLP MVGALMVSAQ IATITLLPRV GPRPVVPLGM LFGGVGMLWL TRLELTSSYA PHILPPLLVL GFGMGLIFAP AMAMATYGVR ADDAGVASAM VNTCQQVGGS IGVALLSTLA ASAATNYAKG KTASSLVTAQ ANLHSYATAY RWSAAFFFVG MVICFLLYRW GAPKGDPEAQ GPVPM
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