| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7770 |
|---|
| Symbol | |
|---|
| ID | 8339146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9009474 |
|---|
| End bp | 9010427 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960854 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003118435 |
|---|
| Protein GI | 256396871 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG ACAGCGCCGC CGCCGTACCC GCGGCGGTGC CGCCCGTTCC GCTCCGCGTC
TCGGCGGTGC ATCGGCCGCC GAAGGCCGAT ATGGCGGTGC TCGGGGTCGC GGTCACCGCG
GTCGGGACCT CCGGGCCGCT CATCGCCGCC GCCGCCGCGC CGGCGATGGC CATCGCCTTC
TGGCGTAACG CGATAGCCGC CGCGGTCTTC GCGCCCTACG TCCTCCTGCG CGCGAATCTG
CGTGCTGAGC TGCGAGGCCT TGGCCGGCGG ACCACCGTCC TGGCCGTCGT CTCCGGTCTC
ATACTCGGCG CGCACTTCGC GACATGGACG CCGTCCGCCA AGCTCTCCTC CGTCGCCTCC
GCGACCGCCT TCGCCGCGAC GCAGCCGATC TTCGCGGCGA TCGTGGCGCG GGTGCTGGGG
CATCACGTAC CGCGGCGCGC GTGGATGGGG ATCGGTGTGG CGTTCGCCGG GGTGTTCGTG
CTGTCGGGGG TGGACTTCCA CGCTTCGTTC CGGGCGTTCG AGGGCGATCT GCTGGCGCTG
ACCGCCGCCG CCTTCGCGGC CGTGTACATG ACCATCGGCG GGGAGGTGCG CAAGACCGCG
TCGCTGCCGG TCTACGCCTT TCTTTGCTAT GGCGCCGCGT CGGTGTTCCT GATCGGCGCC
GTCGGTGCCA CCGGTTCCGC GCTCGTCGGA TTCAGCGGCA ACGCGTGGGT GAAGATCGGG
GCGCTCACCC TTCTGGCGCA GTTCCTCGGA CACACCCTTT TCAACCGGGT CGTGAAGACC
ACCAGCGCGA CGGTCATATC GACATCGATC CTGCTCGAAG TGCCCATGGC GGCGGTGATC
GCAGCCATAT TCCTGCACCA GATCCCCTCT GTGTGGGCGA TTCCGGGGGC GGTGCTGATT
CTGGGCGGGC TGCTGCTCGT GGTGACGGCG AACCGGGGGC AGAGCGGGCA CTGA
|
|---|
| Protein sequence | MTADSAAAVP AAVPPVPLRV SAVHRPPKAD MAVLGVAVTA VGTSGPLIAA AAAPAMAIAF
WRNAIAAAVF APYVLLRANL RAELRGLGRR TTVLAVVSGL ILGAHFATWT PSAKLSSVAS
ATAFAATQPI FAAIVARVLG HHVPRRAWMG IGVAFAGVFV LSGVDFHASF RAFEGDLLAL
TAAAFAAVYM TIGGEVRKTA SLPVYAFLCY GAASVFLIGA VGATGSALVG FSGNAWVKIG
ALTLLAQFLG HTLFNRVVKT TSATVISTSI LLEVPMAAVI AAIFLHQIPS VWAIPGAVLI
LGGLLLVVTA NRGQSGH
|
|---|
| |