| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7762 |
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| Symbol | |
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| ID | 8339138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9001008 |
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| End bp | 9002231 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644960846 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003118427 |
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| Protein GI | 256396863 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCACA CCGTGCGCGA CATCATCCTT CTCGGCTCGA CCGGTTCCAT CGGCACCCAG
ACCCTGGACC TGGTCGCCCG CAATCCCGAC CGCTTCCGCA TCGTCGGGTT GGCCGCCGGC
GGCGGGAATC CGGAGCTCCT CGCCGAGCAG GCGCTGGCCA CCGGCGCGCG CACCGTGGCC
GTCGCCAAGG GCAGTGCCGC GCAGGACCTG AACCTCGCCT TCTACGCCTC GGCCAAGAAA
CGCGGCTACT CCGCCGGCGA GTTCCAGATC CCTGAGATCC TCGCCGGGCC CGACGCCGCC
ACCGAACTCG CCGCCCGCGC GTGCGACATC GTCCTGAACG CCATCGACGG CGCCGCCGGT
CTGAAGGCCA CGCTGGCCGC CCTGGACGCC GGCCGGACCC TCGCGCTGGC GAACAAGGAG
TCGCTGATCA TCGGCGGCGA CCTGGTCGCC CGCCGCGCCA AGCCCGGGCA GATCGTCCCG
GTCGACTCCG AACACTCCGC GCTGGCGCAG GCGCTGCGCG GCGGTCGCGC GGAGGAAGTT
GAGAAGCTCA TCGTCACGGC CTCCGGCGGT CCGTTCCGCG GCCGGACCCG CGCGGAGATG
GCGGACGTGT CGCCCGAACA GGCGATGAAG CACCCGACCT GGACCATGGG ACCGCTGGTC
ACCTGCAATT CCTCGACCCT GGTGAACAAG GGCCTGGAGG TGATCGAGGC GCATCTGTTG
TTCGACGTCC CCTTCGAGCG CATCGAGGTC GTGGTGCACC CGCAGTCCAT CGTGCACTCC
ATGGTGCAGT TCGTGGACGG CTCGACCCTG GCCCAGGCCA GTCCGCCGGA CATGCGGCTG
CCGATCGCCC TGGCGCTCGG CTGGCCCGAC CGGATCCCCG GCGCCGCCCC GGCCATAGAC
TGGACCAAGG CCTCCACCTG GGAGTTCTTC CCGCTGGACG ACGAGGCGTT CCCCTCGGTC
CGGCTGGCCA AGCAGGTCGG CGCAACCGGT GGGACCGCCC CGGCGGTCTT CAACGGTGCC
AACGAGGAGT GTGTGGCGGC GTTCCTCGCC GGCCGCCTCC GCTTCCCGGC GATCGTCGAT
ACCATCGAAC GGGTGGTCGC CGAACACGCC GGTTCAGCGC GCTCTCAGGG TGGGGACCTT
ACCCTGGAGG CCGTTCTGGA GGCGGATTCC TGGGCGCGTA CGCGCGCGCG GGAACTCACA
ACCGGCGGAC AGACATTGAG CTGA
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| Protein sequence | MTHTVRDIIL LGSTGSIGTQ TLDLVARNPD RFRIVGLAAG GGNPELLAEQ ALATGARTVA
VAKGSAAQDL NLAFYASAKK RGYSAGEFQI PEILAGPDAA TELAARACDI VLNAIDGAAG
LKATLAALDA GRTLALANKE SLIIGGDLVA RRAKPGQIVP VDSEHSALAQ ALRGGRAEEV
EKLIVTASGG PFRGRTRAEM ADVSPEQAMK HPTWTMGPLV TCNSSTLVNK GLEVIEAHLL
FDVPFERIEV VVHPQSIVHS MVQFVDGSTL AQASPPDMRL PIALALGWPD RIPGAAPAID
WTKASTWEFF PLDDEAFPSV RLAKQVGATG GTAPAVFNGA NEECVAAFLA GRLRFPAIVD
TIERVVAEHA GSARSQGGDL TLEAVLEADS WARTRARELT TGGQTLS
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