| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7702 |
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| Symbol | |
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| ID | 8339078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8940088 |
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| End bp | 8941089 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960786 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003118367 |
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| Protein GI | 256396803 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.974312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGA ACGCTGATCC CTCCGAACCG TACGCGGCGG ACGCGGACAC CGCGTCCGCC
GCGGCGGGAA CCCGGCCCGC CGCGATCCGT GCGGTGCCGG TCCGCAGACC CGGCCGGTGG
ATAGCCGCGG CCGTCCTGCT GGTCCTGCTG GTGATGTTCG GCCACATGTT GGTCTTCAAC
AAGAACTTCG GCTGGGACCT GGTCAAGCAG TGGCTGTTCT GGCACACCAT CGTCCAGGCG
GTCCTGGTCA CTTTGGAGCT GACCGTCTAC GCGATGCTCA TCGGCATCGT CGGCGGCGTG
CTGCTGGCGG TGATGCGGCT GTCGAGCAAT CCGGTGTCCT CCAGTGCCGC GTGGGCCTAC
ACCTGGTTCT TCCGCGGCAC ACCGGTCCTG GTCCAGCTGC TGTTCTGGAA CAACATCGCG
GCGCTGGTCG GCCAGGAGGT CGGTTTCGGC ATCCCGTTCG GGCCGGAGTT CTTCCACCTG
GACACCAACT CCACCATCAC CCGGTTCACC GCCGCGGTGC TGGCGCTGGG GCTGAACGAG
GCCGCCTACA TGTCCGAGAT CGTCCGGGCC GGCATCCTGT CGGTGGACGA GGGGCAGAGC
GAGGCCGCGG CGTCCCTGGG CATGCGGCGC GCCAAGATCA TGCGCCGGAT CGTGCTGCCG
CAGGCGATGC GGGTGATCAT CCCGCCGACC GGCAACGAGA CCATCAGCAT GCTGAAGACC
TCCTCGCTCG CCTCGGTGAT CGGCGTGGTG GAACTGACCG ACGCCAGCGA GTCCGCGATC
CACCTGTACT TCAAGGCGAT CCCGTTCTAC GTCGTGGCCT CGCTGTGGTA CCTGTTCTTC
ACCACGGTGC TGTCCATCGG CCAGTACTAC ATCGAGCGGC GCTACGCGCG CGGCTCCAGC
CGCGACCTGC CGCCGACGCC CTTCCAAAAG CTGATGAAGG CCAACCTGTC CTTGCGCCGG
CGGAGAACCA GCTGGACCGA TACGAGGGAG GCACTGCGAT GA
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| Protein sequence | MSENADPSEP YAADADTASA AAGTRPAAIR AVPVRRPGRW IAAAVLLVLL VMFGHMLVFN
KNFGWDLVKQ WLFWHTIVQA VLVTLELTVY AMLIGIVGGV LLAVMRLSSN PVSSSAAWAY
TWFFRGTPVL VQLLFWNNIA ALVGQEVGFG IPFGPEFFHL DTNSTITRFT AAVLALGLNE
AAYMSEIVRA GILSVDEGQS EAAASLGMRR AKIMRRIVLP QAMRVIIPPT GNETISMLKT
SSLASVIGVV ELTDASESAI HLYFKAIPFY VVASLWYLFF TTVLSIGQYY IERRYARGSS
RDLPPTPFQK LMKANLSLRR RRTSWTDTRE ALR
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