| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7676 |
|---|
| Symbol | |
|---|
| ID | 8339052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8907242 |
|---|
| End bp | 8908051 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644960760 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003118341 |
|---|
| Protein GI | 256396777 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA CGCACTCCGT GTCCCTGCCC GACGGCGGCC GGCTGGCCTA CCGCGACGAG
GGCAGCGGCC CGCTCGTCGT GCTCCTCCAC GGCGGCTTCC TCGACCACCG CCAGTGGAAC
GCGCAGCTGC AGAGCCTTCC CGCGGACTTC CGCACCGTCG CTCCCGACGC CCGCGGCCAC
GGCGACAGCA CCGTCGCCGC CGCCCCGTTC CGGCACACCG ACGACGTCGC GGCCCTGATC
CGCCACTTCG ACGCCGGCCC GGCGATCCTG GTCGGCGTCT CGATGGGCGC CGCGACCGCG
ACCGACACCG CCCTGGAACA CCCCGAGCTG GTCCGCGCGC TCGTGGTCAG CGGCGCGGGC
ACCAGCGAAC CGGAATTCGC CGACGGCTGG ACCGCGCGGA CCCTGGCGGC GATCTGGCCG
CCGCTGTCCG CCGGCGACGT CGCGGGCGCC CTGAAGATCT GGAACTCCCT CACCACCGGC
CCGCACCGCG ACCCGGCCGA CCTGGACCCC GCGATCCCGG CGCTGATCGC CGAGATGACA
GCCAAGACCT GGGCCAAACA CACGGACACC AAGGACTGGT CCAGCCACGC CGAGAACACC
TGGGCCCGCG CCGCACACCT GAGCATCCCG CTCCTGGCGG TGATCGGCGG CGCCGACTCC
GACGACCACC GGCACAACGC CGAACGCCTC GCCGCCGGCG TAACCGGCGC CCGCACGGTC
ACGATCGCCG ACGCCGCGCA CTACCCGAAC ATGGAGCACC CCGAGGAGTT CGACATGATC
CTCACCGAGT TCATCGACAC GCTGAGCTGA
|
|---|
| Protein sequence | MNATHSVSLP DGGRLAYRDE GSGPLVVLLH GGFLDHRQWN AQLQSLPADF RTVAPDARGH
GDSTVAAAPF RHTDDVAALI RHFDAGPAIL VGVSMGAATA TDTALEHPEL VRALVVSGAG
TSEPEFADGW TARTLAAIWP PLSAGDVAGA LKIWNSLTTG PHRDPADLDP AIPALIAEMT
AKTWAKHTDT KDWSSHAENT WARAAHLSIP LLAVIGGADS DDHRHNAERL AAGVTGARTV
TIADAAHYPN MEHPEEFDMI LTEFIDTLS
|
|---|
| |