Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7619 |
Symbol | |
ID | 8338995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8842040 |
End bp | 8843179 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960703 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003118284 |
Protein GI | 256396720 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACC AGACCCAGCG CCCCCGGCGC CGCACCGGTC CAGACAGCGG CTCCATGTCC CGCCGCAGGG TCGTCATCAT CTGCGCGGCC TCGCTGGCCG TACTGGCCGT CGCCGGCACG ACCGGCCTGT GGACCATGTA CACCCGTTTG AACGACAACA TCCGCACGGT CGACATCCAC GCCGACGACG CGCCGGGACC GGCGGACACC ATGAAGCCGC AGCCGGGGAG CCCGTCCTCC AGCGCCCGCG CCTCGATGAA CGTCCTGCTC ATCGGCTCGG ACGACCGGGA CGGGGCGAAC GCGCAGTACG GCGACGCCAA CTCCGGTGCC CGCTCGGACA CCACGATGCT GCTGCACGTG GCCGCCGACC GGAAGAGCGC GACGGTCGCC TCGATCCCGC GCGACTCGAT GGTGCAGACG CCGGCGTGCA CGAAGTCCGA CGGCACGCAG TCCCAGCCGC AGTTCGGGAT GTTCAACGCG GCGTTCTCGA TCGGCGGGGC GGCGTGCACG GTGAAGACCG TCGAGACCCT CAGCGGTCTG ACAGTCGACC ACGTCCTGGT CGTCGACTTC ACCGGCTTCA AGAAGATCAT CGACGCCATC GGCGGCGTCC CGGTCCACCT GGACCAGGCG ATCGACGACC CCGACTCGCA CCTGAACCTG CCGGCCGGGA CCACCGTGGT GGACGGCGAG CAGGCGCTGG CCTTCGTCCG CGCCCGCCAC AACCTCGGCA ACGGCTCCGA CATCGGCCGC ATGAGCCGCC AGCAGGTGTT CCTGAACGAC GCGCTGGACA CCATCACCGC CAACGGCACC CTGGACGACC CGGCGAAGCT CTACAAGGTC CTGGACGCCG CCACCAAGGC CCTGACGACC GACCCGGCAC TCGGCTCGCT GCCGGCACTG GCGGACTTCG CCTCGGACGT GAAGCAGGTC CCCCGGCAGC AGATCACGTA CCTGACAGTG CCGTGGCAGT GGTACCAGCC GGACCCGAAC CGGGTGCAGC TGGCGCCCCT GGCGCAGGAG CTGTTCACGG CGATGCTGCA GGACACGCCG GTGCCGGCGG AGGTGCTGGC GCTGGCGGCG AAGCAGGGGG AACAGGTGAC GCCGGAAGAC GGCTCGCCCA ATGGCGCGCC TGGCTCTTAG
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Protein sequence | MDDQTQRPRR RTGPDSGSMS RRRVVIICAA SLAVLAVAGT TGLWTMYTRL NDNIRTVDIH ADDAPGPADT MKPQPGSPSS SARASMNVLL IGSDDRDGAN AQYGDANSGA RSDTTMLLHV AADRKSATVA SIPRDSMVQT PACTKSDGTQ SQPQFGMFNA AFSIGGAACT VKTVETLSGL TVDHVLVVDF TGFKKIIDAI GGVPVHLDQA IDDPDSHLNL PAGTTVVDGE QALAFVRARH NLGNGSDIGR MSRQQVFLND ALDTITANGT LDDPAKLYKV LDAATKALTT DPALGSLPAL ADFASDVKQV PRQQITYLTV PWQWYQPDPN RVQLAPLAQE LFTAMLQDTP VPAEVLALAA KQGEQVTPED GSPNGAPGS
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