Gene Caci_7568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7568 
Symbol 
ID8338939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8769071 
End bp8769904 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID644960647 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003118233 
Protein GI256396669 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCG TCTTCGGACA CGGACGGCTG CGGCTGTACC TGTTGAAGCT CCTTGCCGAG 
AGCCCCAAGC ACGGGTACGA GATCATCCAG CAGCTCAAGG AGCGGTTCCA GGGCCTGTAC
GCGCCCAGCG CCGGCACGGT GTACCCCCGC CTGTCGCGCC TGGAGAGCGA GGGCCTGATC
CGGCACGAGA CCGACGAGCG CGGCCGCAAG GTGTACCACA TCACCGACGC CGGCCGCACC
GAACTCGCCG CCCGCGCCGA CGACATGGAC GCGCTGGAGA CCGAGATCCG CGAATCGGTC
AGCAGCCTCG CCGAGGAGAT CCGCGACGAG GTCAAGGAAT CCGCCCGCCA CATCCAGGAG
GAACTGCGCG CCGCCGCGGC CGAAGCCCGC ACCGAGGCGC GCACGGAGTC CCGCACCGAG
CCCCGCAGCG AGCCCAAGCG CGACCACGCC GGCCCCGCCC ACCCCCCGGC GGACCGCTCG
CAGTGGGGCA AGGACGAATG GCGCGAGTGG AAGCGAGCCC AGAACGACTG GAAGGAACAG
TGGAAGGACC AGTGGGCCGC CCAATGGCGC GAACACTGGC AGGACGAAGC CACCCGCTGG
CAGCGCTTCG CCCAGGACAG CGTCGACGAC TGGACCGGCC GCCGCCCCCG CGACCGAGCC
GACCGCGAAC AACTCGACGA ACTCCGAGCC ACCTTCATGC ACTTCCGCGA CGAAGTCCGC
ACCATGGCCC GCGAACACCA GGCCGACATC CCGGTGACCC AGGACCAACT GAACGCCGCC
CGCGAAGTCC TCGAACGCGC CGCCCGCGAG CTGCGCGACA TCTTCCGCGG CTGA
 
Protein sequence
MAPVFGHGRL RLYLLKLLAE SPKHGYEIIQ QLKERFQGLY APSAGTVYPR LSRLESEGLI 
RHETDERGRK VYHITDAGRT ELAARADDMD ALETEIRESV SSLAEEIRDE VKESARHIQE
ELRAAAAEAR TEARTESRTE PRSEPKRDHA GPAHPPADRS QWGKDEWREW KRAQNDWKEQ
WKDQWAAQWR EHWQDEATRW QRFAQDSVDD WTGRRPRDRA DREQLDELRA TFMHFRDEVR
TMAREHQADI PVTQDQLNAA REVLERAARE LRDIFRG