Gene Caci_7561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7561 
Symbolpgi 
ID8338932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8759801 
End bp8761438 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content69% 
IMG OID644960641 
Productglucose-6-phosphate isomerase 
Protein accessionYP_003118227 
Protein GI256396663 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA AGCTCACCGA TCTGCCGCAA TGGAAGGCGC TGGAGACGCA CCACGCGGAG 
TTCGACCGGG TGAACCTGCG CGAGCTGTTC AAGACCGACC CGGCCCGCGC CGAGCGCTAC
TTCGCGCAGG CCGGGGACCT GTCGGTGGAC TACTCCAAGC AGCTGGTCAC CGACGAGACC
CTGCGCCTGC TGCTGGATTT GGCGCGCGAG CGCGGGGTGT TCGAGCTGCG GGACTGGATG
TTCCGCGGCG AGAAGATCAA CCTCACCGAG GACCGCGCGG TGCTGCACGT CGCCCTGCGC
GCCCCGGAGA CCGAGCGCAT CGAGGTCGAC GGCGCCGACG TCGTGCCCGA GGTGCACGAG
GTGCTCCACC GGATGGCGGC GTTCTCCGCC CGGGTCCGCG GCGGGGAGTG GACCGGCGCC
ACCGGCAAGC GCATCAAGAC GGTCGTCAAC ATCGGCATCG GCGGCTCGGA CCTGGGCCCG
GCGATGGCCT ACGAGGCGCT CAAGCCGTAC AGCATGCGCG ACATGCAGTT CCGCTTCGTC
TCCAACGTCG ACGGCGCCGA CCTGTACGAG GCCACGCACG ACCTGGACCC GGCCGAGACG
CTGTTCATCG TCTCCTCCAA GACCTTCACC ACGGTCGAGA CCGTCACCAA CGCCACCTCC
GCCAAGAAGT GGCTCCTGGC CGGCCTCGGC GGCGACGAGT CCGCGGTCGC CAAGCACTTC
GTCGCGGTGT CCACCAACGC CGAAGGCGTC TCCGCCTTCG GCATCGACAC GGCCAACATG
TTCGGGTTCT GGGACTGGGT CGGCGGCCGC TACTCCTACG ACTCGGCGAT CGGCCTGTCG
CTGATGATCG CGATCGGCCC GGAGCGCTTC GAGGAGATGC TCCAGGGCTT CCACACGATG
GACGAGCACT TCCGCACCGC GCCGGCTGAG AAGAACCTGC CGCTGCTGCT CGGCCTGATC
GGGATCTGGT ACCGCGACTT CTGGGACGCC CAGACGCTCG CCGTCCTGCC GTACTCGCAC
TACCTGTCCA AGTTCACCGC GTATCTGCAG CAGCTGGACA TGGAGTCCAA CGGCAAGTCC
ACGCGCCGCG ACGGCGAGCC GGTGGAGTGG CAGACCGGCC CGGTCGTCTG GGGCACCCCG
GGCACCAACG GCCAGCACGC CTACTACCAG CTGATCCACC AGGGCACGCT GCTGATCCCG
GCCGACTTCA TCGGCTTCGA CCGGCCGATC GAGGGCACCG ACCCCTTCGG CCAGCACGAC
GCGCTGATGG CGAACTTCTT CGCCCAGACC GAGGCGCTGG CCTTCGGCAA GACGCGCGAG
CAGGTCGAGG GCGAGGGCGT GCCGGCCGCG CAGGTCCCGC ACCGGATCTT CCGCGGCAAC
CACCCGACCA CCACGGTCAC CGCCCGCCGC CTGACCCCCT CGGTCCTGGG CCAGCTGGTC
GCGCTGTACG AGCACAAGGT GTTCGTCCAG GGCGCGGTCT GGGACATCGA CTCCTTCGAC
CAGTGGGGCG TGGAGCTGGG CAAGGTGCTG GCCAAGAAGA TCGTCCCGGA GCTGTCCTCG
GACGCCGCGC CGGAGCACGA CTCCTCGACC AACGCCGCGA TCGAGCGCTA CCGCGCCGAC
CGCGAGCCGG GGAACTGA
 
Protein sequence
MTEKLTDLPQ WKALETHHAE FDRVNLRELF KTDPARAERY FAQAGDLSVD YSKQLVTDET 
LRLLLDLARE RGVFELRDWM FRGEKINLTE DRAVLHVALR APETERIEVD GADVVPEVHE
VLHRMAAFSA RVRGGEWTGA TGKRIKTVVN IGIGGSDLGP AMAYEALKPY SMRDMQFRFV
SNVDGADLYE ATHDLDPAET LFIVSSKTFT TVETVTNATS AKKWLLAGLG GDESAVAKHF
VAVSTNAEGV SAFGIDTANM FGFWDWVGGR YSYDSAIGLS LMIAIGPERF EEMLQGFHTM
DEHFRTAPAE KNLPLLLGLI GIWYRDFWDA QTLAVLPYSH YLSKFTAYLQ QLDMESNGKS
TRRDGEPVEW QTGPVVWGTP GTNGQHAYYQ LIHQGTLLIP ADFIGFDRPI EGTDPFGQHD
ALMANFFAQT EALAFGKTRE QVEGEGVPAA QVPHRIFRGN HPTTTVTARR LTPSVLGQLV
ALYEHKVFVQ GAVWDIDSFD QWGVELGKVL AKKIVPELSS DAAPEHDSST NAAIERYRAD
REPGN