Gene Caci_7544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7544 
Symbol 
ID8338914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8744080 
End bp8745105 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID644960623 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_003118210 
Protein GI256396646 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.166412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGC TTTGCCCTAC GTTCACCGTC TGTTTCCCCG AGCTGCCGGA CGCCCCGCGT 
ATTCTCCGGC AGACTGCATC CATTTTCCGA CAGGGGTACG AGTTGTCCGG CCTCAACTAT
CTCGAAGCCT GCACCATCGG GCTGGTCCAA GGCGTCACCG AGCTGTTCCC CATATCCAGC
CTCGGCCACT CGATAATCCT GCCGGCCTTC ATCGGCGGAA GCTGGAAGGC CGATCTGGAC
ATGACCGCCA AGGACTCGCC GTATCTGGCG TTCCTGGTGT TGGCGCACGT GGCGACCGCG
CTGGCGCTGG TGGCGTTCTT CTGGCGGGAC TGGGTGCGCA TCATCAGGGC CCTGTTCACC
TCGGTCAAGG ACCGCAGCGT GGAGACCGCC GACCAGCGCC TGGCGTGGCT GCTGGTGGTC
GGCACGATCC CGGTCGGGCT GATCGGGATC GTGGCGGACA AGGAGCTGCG CACGCATCTG
GGCAAGCCGA TACCGGCGGC GATCTTCCTG CTCATCAACG GCTTCGTCAT CTTCCTCGCC
GACTCCATGC TCAAGAGCTC CTCCAAGGGC CGGCACGCCG ACGACGGCAC CACGCCGGCC
ACGCACGGGG AGTCCACCGA GATCGCCGCC GACCGCAGGC TGGCCCGGCT GGGCTGGAAG
TCCGCCGCGG GCATAGGCGG CGCGCAGGCC TTCGCGCTGC TGCCGGGCAT CAGCCGCTCC
GGCATCACCA TGGTCGCCGG GCTCGCCCGC GGCCTGAAGA CCGAGGACGC GGCGCGCTTC
GCCTTCCTGC TGGCCACCCC GGTGATCCTC GCCGCCGGCG TGTACAAGGC TCCCGAGCTG
GCCAAGCCGG CGAACCACAG CATCCTCGGA CCGGCTGTCG CCGGCTCGGT GCTGGCCGGG
ATCGCCGCCT ACATCTCGGT GCGCTTCCTG ACCAAGTACT TCGAGAACCG CGATCTGAAG
CCGTTCGGCG TCTACTGCGT GATCGCCGGC ATCGTGTCGC TGGTCTGGTT CTCGGTGCAC
CACTGA
 
Protein sequence
MLLLCPTFTV CFPELPDAPR ILRQTASIFR QGYELSGLNY LEACTIGLVQ GVTELFPISS 
LGHSIILPAF IGGSWKADLD MTAKDSPYLA FLVLAHVATA LALVAFFWRD WVRIIRALFT
SVKDRSVETA DQRLAWLLVV GTIPVGLIGI VADKELRTHL GKPIPAAIFL LINGFVIFLA
DSMLKSSSKG RHADDGTTPA THGESTEIAA DRRLARLGWK SAAGIGGAQA FALLPGISRS
GITMVAGLAR GLKTEDAARF AFLLATPVIL AAGVYKAPEL AKPANHSILG PAVAGSVLAG
IAAYISVRFL TKYFENRDLK PFGVYCVIAG IVSLVWFSVH H