| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7525 |
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| Symbol | |
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| ID | 8338895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8718027 |
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| End bp | 8718911 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960604 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003118191 |
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| Protein GI | 256396627 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.507002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC CGGTCCCCGT GGACCCCGAA TCCGTCCGGC GGGCGAACCT GCGCGAGTTC
CTGGTCGCCC GCCGCGCCCG GATCACGCCC GAGGAGGTGG GCCTGGCGCC CGGCAGCCGC
CGCCGCACCC CGGGCCTGCG CCGCGAGGAG GTCGCGGTCC TCGCCGGCGT CGGCACCTCC
TGGTACCAGT GGCTTGAGCA AGGACGCGAC ATCACGGTGT CCTCGCAGGT CCTTGACGCA
GTCGGCCGCG TCCTCAAACT CGACGAGCCC GAAACCCGCC ACCTGTACGC CCTGGCCGGC
CTCAACCCAC CCCCCGTCGG CCGCCTGTCC CCCGCCGACG CCGCCGGCCC GGTCGACCAA
GCCCTGGTCC ACCTCGTGGA CACCTGGCTC CCCAACCCCG GCATGATCAT CGACCGCTAC
TGGAACATCG TCGTCGCCAA CCGCGCGGCA GAACTGGCCC TGCACACCAC CAAGACCGGC
TGGAACTGCC TCCACCAGTA CTTCCTCGAC GAGATCTACC GCGAATCACT GGAGAACTGG
ACGGAACTCG CGCCCCGCGT AGTCGCGACG TACCGCTCAG AGATGACGGC CTCCCCCGGC
GACGAAGGCT TCCGCCTGGT AGTGGAGAAC CTACTGACGC AGAGCACTGA GTTCGCCGAA
CTGTGGGCCC GCCAAGGCGT CGCACACAGC GGCGTGAACC TGAAGTCGAT GAGCTCCCGC
GTCGGACCCC TGCACTTCGA ATCGGTGACC CTCGCCGTCC CAGACCGCGC GGACCTCCGA
ATCGTCCTCC ACAACCCCCA AGCCGGCTCC GACACCCGCG CGAAGATGGA GCGCTTGCTG
GCGGAGGACG AGCGGCGGAA CGGGTTGCGG TTGGTGGCGG GGTAG
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| Protein sequence | MTTPVPVDPE SVRRANLREF LVARRARITP EEVGLAPGSR RRTPGLRREE VAVLAGVGTS
WYQWLEQGRD ITVSSQVLDA VGRVLKLDEP ETRHLYALAG LNPPPVGRLS PADAAGPVDQ
ALVHLVDTWL PNPGMIIDRY WNIVVANRAA ELALHTTKTG WNCLHQYFLD EIYRESLENW
TELAPRVVAT YRSEMTASPG DEGFRLVVEN LLTQSTEFAE LWARQGVAHS GVNLKSMSSR
VGPLHFESVT LAVPDRADLR IVLHNPQAGS DTRAKMERLL AEDERRNGLR LVAG
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