Gene Caci_7471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7471 
Symbol 
ID8338841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8662414 
End bp8663313 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content74% 
IMG OID644960550 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003118137 
Protein GI256396573 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA CCGCGCCCCA GCCCGAGCAC AGCAGCCCGA CCACCGAGAC CACCCAGACC 
GGCCAGCCCG ATCACGCCGA CCACGCCGAC CACGCCGACC GCCCCGCCAG CCGCTACGAC
CGCGGTCTGG CCCTCCTCGG GCAGGTCGGC GGCACCGACC CGACCCGGGC GCTGGCCGGC
CTCGCCGACA CCGCTCCGGA CCTGGCGCGC CTGACCATCG AGTTCTACGC CGACATCTAC
TCCCGGCCCG GGCTGACCCT GCCGCAGCGG CAGATCATCA ACATCGCCGC GCTCACTGCC
CTGGGCACCG CCGCCCCGCA GCTGCGCTTT CACATCGACG GCGCTCTGAA CGTCGGCGTC
GGCCCGACCG AGATCGTCGA GGTGATCATG CACATGAGCG TGTACGCCGG GGTGCCGGCC
ACGCTCAACG GGCTCGCCGT CGCCAAGGCC GCCTTCGCCG ACCGGACCGA TCTCGACTGG
TCGCCGACAG CGTCCCCGAT CGAGGAGCAG GAGAGCGCCG AGCAGCGCTA CAACCGCGGG
CTGGACGCGC TGCAGGCCAT CGACGGCCGG GCCGGCGACC AGGTCATGGC CTCGCTGGCG
CCGATCTCGC CGGACTTCGC CCGGCTGCTG GTCGGATTCG CCTTCGCCGA CATCTACTCC
CGCCCCGGCC TGGACCTGAA GAGCCGCGAG CTGGCCACCG TCGCGGCCTG CACCGCGCTC
GGCACCGCCG CCGCGCAGCT GCGGGTGCAC CTCCACGGCC TGCTCAACGT CGGCGGGACC
CGCGAGGAGC CGGTCGAGGC GATCATGCAG ATGGCCGGAT ACGCCGGCTT CCCCGCCGCT
CTCAACGGCA TCGCCGCAGC TCGCGAGGTG TTCGCCGAGC GCGCGGGCGC CGAGGGGTAG
 
Protein sequence
MSGTAPQPEH SSPTTETTQT GQPDHADHAD HADRPASRYD RGLALLGQVG GTDPTRALAG 
LADTAPDLAR LTIEFYADIY SRPGLTLPQR QIINIAALTA LGTAAPQLRF HIDGALNVGV
GPTEIVEVIM HMSVYAGVPA TLNGLAVAKA AFADRTDLDW SPTASPIEEQ ESAEQRYNRG
LDALQAIDGR AGDQVMASLA PISPDFARLL VGFAFADIYS RPGLDLKSRE LATVAACTAL
GTAAAQLRVH LHGLLNVGGT REEPVEAIMQ MAGYAGFPAA LNGIAAAREV FAERAGAEG