| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7469 |
|---|
| Symbol | |
|---|
| ID | 8338839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8660754 |
|---|
| End bp | 8661536 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644960548 |
|---|
| Product | protein of unknown function DUF88 |
|---|
| Protein accession | YP_003118135 |
|---|
| Protein GI | 256396571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCGG AGAACCCGGT CAAGCTGGCG GTGCTGATCG ACGCCGACAA CGCCCAGCCG
TCCAACGCGG CGACGCTGCT CGCGGAGATC GCCAAGTACG GCACGGCGCA CGTCAAGCGC
GCCTACGGCG ACTGGACCGG GACCAGCCTC AAGGGCTGGA AGGAGCACCT GCTCGCGCTG
AGCATCCAGC CGATCCAGCA GTTCGCCTAC ACCTCCGGCA AGAACGCCAC CGACGCCGCG
ATGGTCATCG ACGCCATGGA CCTGCTGTAC TCCGGGCGCT TCGAGGGGTT CTGCATCGTC
TCCTCCGACA GCGACTTCAC CCGCCTCGCG GCCCGGATCC GCGAGTCCGG CCTGATCGTC
TACGGCTTCG GCGAGCGCAA GACGCCGAAG CCGTTCGTCG CGGCGTGCGA CAAGTTCGTC
TACACCGAGA ACCTCGCCTT CGCCGAGGAG GGCGCGTTCC CCGACGAGAT CGTCCCGAGC
ACCGTGGAGA AGCCGACAGC CAAGATCGCG GCGACGAAGC TGCGCGGCGA CGCGAAGCTG
GTGAACCTGC TGCGCAACGC GGTTGAGGCG GCCAGCGACG AGGACGGCTG GGCCGGGTTG
TCCGGCGTCG GCCACATCCT GACCAACCAA CAGCCGGACT TCGACTCCCG CACCTACGGC
TACCCCAAGC TCAGCAACCT CGTGACCGCG ACCGGCCTGT TCGACGTCGA CCGCCGCAGC
ACCGGCGAGG GCAAGCCGGC GCAGATCCAC ATCAGGGACA AGCGGTACGA GTCGCGGCCG
TAG
|
|---|
| Protein sequence | MVAENPVKLA VLIDADNAQP SNAATLLAEI AKYGTAHVKR AYGDWTGTSL KGWKEHLLAL
SIQPIQQFAY TSGKNATDAA MVIDAMDLLY SGRFEGFCIV SSDSDFTRLA ARIRESGLIV
YGFGERKTPK PFVAACDKFV YTENLAFAEE GAFPDEIVPS TVEKPTAKIA ATKLRGDAKL
VNLLRNAVEA ASDEDGWAGL SGVGHILTNQ QPDFDSRTYG YPKLSNLVTA TGLFDVDRRS
TGEGKPAQIH IRDKRYESRP
|
|---|
| |