Gene Caci_7458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7458 
Symbol 
ID8338828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8645310 
End bp8646431 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content58% 
IMG OID644960537 
Producthypothetical protein 
Protein accessionYP_003118124 
Protein GI256396560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0297614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.563614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCT TCATCAGCAG CGCACGAAAG GGTCTGGAGA AAGAGCGCGA CTCGCTTCCC 
GGCTTGATCA CTGCGCTGGG TCATACACCA GTACACTTCG AGGACTTCTC AGCCCAGTCC
ACGCCCAGTC GAGAGGCATG TCTGGCTGCC CTGGATTCGG CGGATGTTTG CCTGCTCCTG
TTGGGCCCGA ACTACGGCCA CATTTTCCCG GAGACTGGAC AGTCTGCCAC CCATGACGAA
TGGATTCACG CCCAGGTCAA GGGGATTCCG CGGCTCGTTT TTCGCAAGGC CGGGGTGAAG
CTCGAGCCCA AGCAGCACGA GTTCGCCCAA ACCGTGGAGG CATACGCCAC AGGCGTATTC
CGGACTACCT TCGAGGACAC CCCAGATCTC CAGATCAAGA TTGCCCAAGC GCTGCGCGAG
TTGGGCTCGA AGCCGTCCCC CCTTGAATTC AAGAGGTTGA CTCAGCCGCT GGCAATAAGC
TGGACTTCGG CGGAAAATGG AGCGAATTCC CCTCTTAGTG ACCGCGGAGC TCTCCTCGAA
ACTCACGTCG CACCCGTGGA TCACTCGGGA TACTCTGCTC GCGAAATGGA GTCGTTGATC
AATTCGATGC AGAACCGCGT TCGCGCGACC CACTACATCC AGAACGACGT CGCGCTTAGC
CTCTCCCGGT CAAAGGATCA TGCGGTCGTC AGAATTGAGG ACAGTGATCG TCCGGCCTGG
GACAAACCCA AGGCCGGAAG GCTTCTCGAA GTTCGGCTAT ACCAGACTGG TCAGATCTCA
ATCAGAGCCA CGCTCCCAAG AGACCGGATA GGATCAATTC TGGATCGTAA GGCGCTAACC
CAGCAGATCG CTGAAATGCT TCGACTTACG GGAGCCTTGG GCATCATCGA GCAGGGGCAT
GTAGCGGTAG CAGTTGGAGT GTTGCCAGAG ATGACCACCA GCGTCGACAC CTTTGATCCA
AACCACCCGC GGTCCAGTGC CCAGTTCATG CGCTTCGGCC AGTCGCCTGA CATGGTACGG
ATCGAGCCGG ACGAATCGGT CAACCTCACA GCCTTGGGGG TCGGAGCAGG CGAAGTGGCT
GGCAATCTCT CTCAAGCACT GTTTACTCAG CTCACGATGT AG
 
Protein sequence
MKIFISSARK GLEKERDSLP GLITALGHTP VHFEDFSAQS TPSREACLAA LDSADVCLLL 
LGPNYGHIFP ETGQSATHDE WIHAQVKGIP RLVFRKAGVK LEPKQHEFAQ TVEAYATGVF
RTTFEDTPDL QIKIAQALRE LGSKPSPLEF KRLTQPLAIS WTSAENGANS PLSDRGALLE
THVAPVDHSG YSAREMESLI NSMQNRVRAT HYIQNDVALS LSRSKDHAVV RIEDSDRPAW
DKPKAGRLLE VRLYQTGQIS IRATLPRDRI GSILDRKALT QQIAEMLRLT GALGIIEQGH
VAVAVGVLPE MTTSVDTFDP NHPRSSAQFM RFGQSPDMVR IEPDESVNLT ALGVGAGEVA
GNLSQALFTQ LTM