| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7401 |
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| Symbol | |
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| ID | 8338771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8584896 |
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| End bp | 8585585 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644960481 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003118068 |
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| Protein GI | 256396504 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.263718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCC TCGTGGTGGA CGACGACCAG GCGGTCCGGG ACTCGCTGCG CCGCTCGCTG
GCCTTCAACG GCTACGAGGT CGAGCTGGCG GCCGACGGAC TGGCGGCGCT GGAAGCGATC
GCGAAGCGGC GGCCGGACGC CGTCGTGCTC GACGTCATGA TGCCCCGGCT CGACGGCCTG
GAGACCTGCC GGCGGCTGCG CTCGGCCGGC GAGGACCTGC CGGTCCTGCT GCTCACGGCA
CGCGACGCCG TCCCGGACCG GGTCGCCGGC CTGGACGCCG GCGCCGACGA CTACCTCCCC
AAGCCGTTCG CGCTGGAGGA GCTGCTGGCG CGGCTGCGCG CCCTGCTGCG CCGCACCCAG
GGCAGCCTGG CCGACCAGTC CGACGCCCCG CTGGCCTTCG CCGACCTCAC GCTGGACCCG
GCCACCCGCG AGGTGACCCG GGCCGGCAAG CCGGTGCGCC TGACCCGCAC CGAGTTCAAC
CTGCTGGAGC TGCTGATGCG GCACCCCCGG CAGGTCCTGA CGCGGGCGCA GATCCTGGAG
GAGGTCTGGG GCTACGACTT CCCGACCACC GCCAACTCCC TGGAGGTCTA CGTCGGCTAC
CTGCGCCGCA AGACCGAGGC CGACGAGCTG CCCCGCCTGA TCCACACCGT CCGCGGAGTG
GGGTATTCCC TGCGTGAGAC CGCGCCGTGA
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| Protein sequence | MHILVVDDDQ AVRDSLRRSL AFNGYEVELA ADGLAALEAI AKRRPDAVVL DVMMPRLDGL
ETCRRLRSAG EDLPVLLLTA RDAVPDRVAG LDAGADDYLP KPFALEELLA RLRALLRRTQ
GSLADQSDAP LAFADLTLDP ATREVTRAGK PVRLTRTEFN LLELLMRHPR QVLTRAQILE
EVWGYDFPTT ANSLEVYVGY LRRKTEADEL PRLIHTVRGV GYSLRETAP
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