Gene Caci_7358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7358 
Symbol 
ID8338728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8539941 
End bp8540444 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content70% 
IMG OID644960439 
Productthioesterase superfamily protein 
Protein accessionYP_003118026 
Protein GI256396462 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.249412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CCGGCCAGAC CAGCACAGGC GGCACGACGA CCGCCTCCCG CTCCCGGACG 
GCGCCCCCAG CGCCGGCCGG GCCGGGACGG CGGCATGTCT ACCTGTGCCC GCTGCGGTGG
TCGGACATGG ACGCCTACCA GCACGTGAAC AACGTGGTCT ACCTCCGGTA CCTGGAGGAG
GCGCGCGTGG ACTGGATGTT CCGCCGCGCC TCCGAGGCCG GGGTGGAGGG CTTCGCCACG
TTCGGCACGG TGGTGGCCAA GCACGAGATC GAATACCGGC GCCCGCTGGT CTACCGGCCC
GAGCCGGTGC GGGTCGAGGT CTGGGTGACC GCCATCGCGA CGGCGAAGTT CACCGTGGCC
TACGAGGTCT GCGACGACGA TGGCGTCTAC GCGACCGCCT CCTCGGTCCT CGTGCCGTTC
AACATCGAGG GAAACCACCT GCGGCGGCTG TCGCAGGTCG AGAAGGACTA CCTCGCCGAG
TACTACACCC CGGTGGAAGC GTGA
 
Protein sequence
MSGTGQTSTG GTTTASRSRT APPAPAGPGR RHVYLCPLRW SDMDAYQHVN NVVYLRYLEE 
ARVDWMFRRA SEAGVEGFAT FGTVVAKHEI EYRRPLVYRP EPVRVEVWVT AIATAKFTVA
YEVCDDDGVY ATASSVLVPF NIEGNHLRRL SQVEKDYLAE YYTPVEA