Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7320 |
Symbol | |
ID | 8338689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8503651 |
End bp | 8504517 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644960402 |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_003117990 |
Protein GI | 256396426 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000252308 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000279842 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCCCGTC TACTAAGGAG CCAGACATGC CCGCCCCTAA CGCCCGCATC TTCGTACCAC CCAAGCCGCC CAGTCCGTTC GCCAACTCCG GAGCGATGTC AGCAGGTACG GAGCGAGAAC TGTTGCCGCT GCCTCCGTTC AGGGGCGAAC GGCGCGGCAC GTGGGACCCT CATGCACACT GGCCCAGCCC GGAGACCATG CGCTTGTTGC GCTCACAGTG GGCTTGGTTT GAGGCTGGAT TGTGTGGTGA CTCACCACTT GTCCAGCTGC TCAAGTCCCT GGACGAGCCC CAGCCTGAAG CTGAGGCCTG ACATGTGCCA TAGCTACTGG ACGAGATCGT TCAAGGGACT GCCGGAACAG GTTGCAGATG TCCGGGAGCT CATTCGCTGG GTCATCGGCG ACGTCGATGG TGCCGACGAC GTTGTGTTGG TCGCTTCGGA ATTGGCGGCC AACGCCATCC GGCACAGCGC CAGTGGAGAC CTTGGTGGGA GCTTGGCGCT CCAAGTGGCG GCGTTCTCAG ACGCCTGGCA TGTCCGCCTC ACCGACCAGG GCGGCCGTAC CAACCCGACG TGGGAGCCAG CAGATGACGA CGAAGCCGGC CGGGGGTTGC CGGTGGTCAT GGCGCTGTCC CGCGCCTGGG GCGTGATCGG GGGCAGCACT GGTCGCACTG TCTGGGCTGA GATCCCGTAT CCCAAGGACG ACGTAGCGGC GGAGTTCTAC GAGGGCGACG TCGAGCGCGG TCAGCAGGAA CCAGCCCTCA GCGTTGTCGA CCATTCGCAG CTCGGATGCC GCCCTACAAC CCCACTCGTT CCAAGATGGT CTGCACCGTT GTTCCCAGCG CCTTGGCAAC ATGGTGCAGC TCAATGA
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Protein sequence | MPRLLRSQTC PPLTPASSYH PSRPVRSPTP ERCQQVRSEN CCRCLRSGAN GAARGTLMHT GPARRPCACC AHSGLGLRLD CVVTHHLSSC SSPWTSPSLK LRPDMCHSYW TRSFKGLPEQ VADVRELIRW VIGDVDGADD VVLVASELAA NAIRHSASGD LGGSLALQVA AFSDAWHVRL TDQGGRTNPT WEPADDDEAG RGLPVVMALS RAWGVIGGST GRTVWAEIPY PKDDVAAEFY EGDVERGQQE PALSVVDHSQ LGCRPTTPLV PRWSAPLFPA PWQHGAAQ
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