Gene Caci_7281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7281 
Symbol 
ID8338649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8460133 
End bp8461356 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content72% 
IMG OID644960362 
Productrod shape-determining protein RodA 
Protein accessionYP_003117951 
Protein GI256396387 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGA ACCCCGCGAT CTACAAAGGC CCGGCCGCGA TGCCGGTCGC CGAGAGCCGC 
CGCCGCGCCA GCCGGCTGCG CCGCTTCGAC TGGACGCTGC TGGCCGCGGC GCTGGCGCTG
GCGGTCTACG GCGCGGTCCT GGTGTGGTCG GCGACCCGCG GACGCACCAG CCTGACCGGC
GGCGACCCGC AGTTCTTCCT CAAGCGGCAC CTGATGAACC TGGCGATCGG CCTGGTCCTG
ATGGTGCTGA CGTCGCTGCT GTCCTACGCG TGGATCCGCG CGGTCACGCC GGTGTTCTAC
GTGCTGGCGC TGCTCGGGCT GGCCGCGGTG CTCAGCCCGC TGGGCTCGAC GGTCAACGGC
GCGAAGTCCT GGATCGAGCT CGGCGGCGGG TTCTCCATCC AGCCCGCCGA GTTCGCCAAG
GTCGCGGTGG TCCTGGGCCT GGCGGTGGTG CTGACGCTGG CGCCGGCCAA GGGCGCGCTG
TCCGGGATGT CCGAGCGGGA CGACGCGGTC ACCCCGCGCC GGATCGCGCT GGCGGGCCTG
GCCGCCGGCA CGCCGACCAG CATCATCATG CTCCTGCCGG ACCTGGGCTC GGCGATGGTG
ATCCTGGTCG CCACCGCCGG CCTGCTGGTC TTCGCCGGGA CCAGCGGCCG CTGGCTGGCC
GCCCTCGGCG TCGGCTCGGC GGTCGCCGCG CTCGCCGCCA CGCAGCTGCA CCTGCTGGCC
CAGCACCAGG TCAACCGGTT CGCGGCGTTC GCCGACCCGC ACCTGGACCC GCAGGGCGTC
GGCTACAACA CCGCGCAGGC GCGCCTGGCC ATCGGCTCCG GCGGCGTGCT GGGCAAGGGA
CTGTTCAACG GCACGCAGAC CAACGGCCGC TACGTCCCCG AGCAGCAGAC GGACTTCGTC
TTCACGGTCG CCGGGGAGGA GTTGGGCTTC GTCGGCGGTG TGGTCCTCAT CGCGCTGTTC
GCGGTCCTGC TGCTGCGCGG CATCGCCATC GCCCGGCAGT GCGAGGATCT GTTCGGGATG
CTGGTCTGCG CCGGCGTGGT CAGCTGGTTC GCCTTCGAGA CCTTCGAGAA CATCGGCATG
ACGCTGGGCA TCATGCCGGT CGCGGGCATC CCGCTGCCGT TCGTCTCCTA CGGCGGCTCC
TCGATGTTCG CCAGCTTCAT CGCCGTCGGG CTGGTGGAGA ATGTGCGGCT GCGCTCGACC
CGGCCGGCGA TCACGGTGGA GTGA
 
Protein sequence
MTLNPAIYKG PAAMPVAESR RRASRLRRFD WTLLAAALAL AVYGAVLVWS ATRGRTSLTG 
GDPQFFLKRH LMNLAIGLVL MVLTSLLSYA WIRAVTPVFY VLALLGLAAV LSPLGSTVNG
AKSWIELGGG FSIQPAEFAK VAVVLGLAVV LTLAPAKGAL SGMSERDDAV TPRRIALAGL
AAGTPTSIIM LLPDLGSAMV ILVATAGLLV FAGTSGRWLA ALGVGSAVAA LAATQLHLLA
QHQVNRFAAF ADPHLDPQGV GYNTAQARLA IGSGGVLGKG LFNGTQTNGR YVPEQQTDFV
FTVAGEELGF VGGVVLIALF AVLLLRGIAI ARQCEDLFGM LVCAGVVSWF AFETFENIGM
TLGIMPVAGI PLPFVSYGGS SMFASFIAVG LVENVRLRST RPAITVE