Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7198 |
Symbol | |
ID | 8338566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8366587 |
End bp | 8368164 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960279 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_003117868 |
Protein GI | 256396304 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAATCC CCCGCCCCGC CGAGTACACC GCGCGCTCCG GCGAGTTCGT CCTGGGACCG GCGTTGAACC TGGCCGCCGG TCCCGGAGCC GAACGCCCCG CCGACCTGCT CGCGGCCTAC CTCGGCGCCG GCCGCCCGCG CACCGGCGCC GGCCCGGCCG TCGCCCTCCG CCTCGACGAC GGCGCCCACG ACCATCCCCA CGGCTACGAC CTGCTGGTCA CCCCGGAACA GGTGACGCTC ACGGCGCCGA GCGAAGCAGG GCTCTTCAAC GGGGTGCAGA CGCTGCGGCA ACTGCTGCCC GCGCAGACGC TGTCAGCCGA TCCCGCCGTC CCCGCCGACG CCTGGCGCTG GCCCGCCTGC CACGTCCGCG ACGCACCCCG CCTGGCCTGG CGCGGCGTGA TGCTCGACGT GGCACGGCAC TTCATGCCGA TCGAGTTTCT CTACCGGCTC GCCGACGAGA TCGCGCTGCA CAAAATCAAC ATCCTGCATC TGCACCTCAC CGACGACCAG GGCTGGCGCG TCGAGATCGA CGGCCTGCCC CGGCTCACCG AAATCGGTTC CACCCGCACC GCATCGATGG TCGGCCGCGC CGGATCCACG GTGTTCGACG GCGTCCCGCA CTCCGGCTAC TACACCCGCC GGGAGCTCGC CGACCTCGTC GAGTACGCGG CGGCGCGCGG CGTCACGATC GTCCCCGAGA TCGGCATGCC CAGCCACACC CGCGCGGCGC TCGCGGCCTA CCCGGAACTC GGCAACCACC CCGAGACCGC GCTGCCGGTG TGGACGTCCT GGGGCATCAG CGAGGACATC CTCGCAGTGC ACGACGAAGC GCTCGACTTC TGCCAGCACG TGCTGTCGGA CGTGATGACG CTCTTCCCGT CCCGGAACAT CCACATCGGC GGCGACGAAT GCCGGACCGT CCAGTGGGAG GACAACGCCG ACGCCCGCCG CCGGATCGAG CAGGAGGGTT TGCCGAACGT CTCCGAACTG CTGGGCTGGT TCCTGAGCCA GATGCACGGA TACCTTGCCG AACACAGACG CCGCGCCGTC TGCTGGAACG ACGCGGTCGG CGTCGGCAAC CTCGACCCGG GGGTGGTCGC GACGGCCTGG CTGAAGCCGG AACACGCCGC GGAGGCGATA GCGCGCGGCC ACCAAGTGAT CGTCGCCCCG CACGAACACA CCTACCTGGA CTACCGCCAG ACCAGCCACC CCGCCGAGCC GCCCTCGGCG GACGACCGCG TCCTGACCCT CGCCGAGGCC TACTCCTTCG ACCCGCTGCC GACCGATCTG TCCGCCCTCG GCGTCGCCGC CTTGACCGAC GCCTCCGGCG GACCCGGCGT CCTGGGAACC CAGGCGCAGC TGTGGACCGA GTCCGCACCC ACGACCGAGG TTGTCAGGCA TCTGCTGTAC CCGCGCCTGT GCGCCCTGGC CGAGGGCGCG TGGAGCGACG AGCGCCGCGA TCCCGCCGAC TTCGCCCGCC GCCTCCAGCA CCACCTGCTC CGGCTGGACG CGCTCGGCGC GCTGCCCGCC GCCCGGCCGG ACGGCTGGGA CCCGGGCGCC GGGCTGTCAA TGCCCTGA
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Protein sequence | MIIPRPAEYT ARSGEFVLGP ALNLAAGPGA ERPADLLAAY LGAGRPRTGA GPAVALRLDD GAHDHPHGYD LLVTPEQVTL TAPSEAGLFN GVQTLRQLLP AQTLSADPAV PADAWRWPAC HVRDAPRLAW RGVMLDVARH FMPIEFLYRL ADEIALHKIN ILHLHLTDDQ GWRVEIDGLP RLTEIGSTRT ASMVGRAGST VFDGVPHSGY YTRRELADLV EYAAARGVTI VPEIGMPSHT RAALAAYPEL GNHPETALPV WTSWGISEDI LAVHDEALDF CQHVLSDVMT LFPSRNIHIG GDECRTVQWE DNADARRRIE QEGLPNVSEL LGWFLSQMHG YLAEHRRRAV CWNDAVGVGN LDPGVVATAW LKPEHAAEAI ARGHQVIVAP HEHTYLDYRQ TSHPAEPPSA DDRVLTLAEA YSFDPLPTDL SALGVAALTD ASGGPGVLGT QAQLWTESAP TTEVVRHLLY PRLCALAEGA WSDERRDPAD FARRLQHHLL RLDALGALPA ARPDGWDPGA GLSMP
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