| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7188 |
|---|
| Symbol | |
|---|
| ID | 8338556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8358890 |
|---|
| End bp | 8359237 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644960269 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003117858 |
|---|
| Protein GI | 256396294 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTCT CTTGTACAGT GAGACAGATC GCCGACCGTG TGGTGCTCAC GGTCGCCGGC
GACGTGGACC TCGCCGTTCA TGGGCGCTTC GAGGCGGACG TCGAACAGTA TTGGGACGCC
TCGACGGATC TGGTCATCGA CTGCTCACGG ATTACTTTTC TAGACTCTAT GGGACTCCGT
GTTCTGGTGC ACGCGATGCA GCGCGCGGCC GGCAATGGAC GTGACATCGC GATCGCGGCG
CCGTCCGACC CGGTCCTCCG GGTGCTGGAC CTCGCGGGCA TCAGGAGCCT GTTCACGGAG
ATCGGACCGG TTGCCGACGC CGCTCCTGAC CCGGACCCCG CCACCTGA
|
|---|
| Protein sequence | MEFSCTVRQI ADRVVLTVAG DVDLAVHGRF EADVEQYWDA STDLVIDCSR ITFLDSMGLR
VLVHAMQRAA GNGRDIAIAA PSDPVLRVLD LAGIRSLFTE IGPVADAAPD PDPAT
|
|---|
| |