Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7170 |
Symbol | |
ID | 8338538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8342907 |
End bp | 8345240 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960251 |
Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
Protein accession | YP_003117840 |
Protein GI | 256396276 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATC AGCCAGGCGC GGAGTTGGTG CTCCAGACCG AGGGCGACTC GCGGGTGATG AGCCCGAGCC GCGAGTATCA GATCGGCCGC GATCCCCTTG GCGACGTGGT CCTTACCGAT CCCCGGGTCT CCTGGCACCA CGCCGTGCTG CACGTCGACC GCGGGCATTG GGCCTTGGAC GACGTCGGAA GCACCAACGG CACCTACGAC GGCCAGGGCC ACCGGGTCAG GCATCTCGAG GTCGGCCCGG GCTCGATGCT CCGGTTCGGC AATCCGCAGG ACGGACCGCG GGCCAGCCTG CTCGCCGTGG CGCGCCCCGC CACCCCGAAG AAGGCCGCCC GGCCCTCCGC GCTCACCGCG ATCACCGGCT CCTACCGGCA GCCGACGACG GTGCGCCCCC TTCCCGAGCG CACCGTCCGC ATCGGCCGCG CCCTGGACAA CGACCTGGTC GTCGAGGACC TGAGCGTCTC GCGCTCGCAC GCCGAGCTGC GCACCCGCCC CGACGGCCGC CACGAGATCG AGGACCTGGG CAGCCACAAC GGCACGTTCC TCAACGGCCA GCCGGTGCTG ACCGCGATCG TCGAGCCCGG CGACCTGATC GGCATCGGGC ACTCGGTCTT CTGCCTGGTC GGCGACGAGA TCCAGGAGTA CGTCGACACC GGCGAGGTCG CGCTGCAGGT CGAAGGGCTG TCGGTGCAGG TCGGGCCGGA GCCGCGCGTC CTGCTGGACG CCGTCTCCTT CCCGGTCGCC GAGAAGTCGC TGCTGGCCGT GGTCGGGCCC AGCGGCGCCG GCAAGTCCAC GCTGCTCAAC GCGCTCACCG GGATGCGCCC CGCCGACCGG GGCAGCGTGC GCTACGACGG CCGCGACCTG TACCAGGACT ACGCCGAGCT GCGGCAGCGC ATCGGCCTGG TCCCGCAGGA CGACATCCTG CACACCCAGC TGGGAGTCCG CCGCGCCTTG TCCTACGCCG CCGAGCTGCG CTTCCCTGGC GACACCGAGA AGGGCGAGCG GGCGGACCGG GTCGAGGAGG TCATCACCGA ACTCGGGCTG ACACAGCGCG CGGACCAGGT GATCTCCAGT CTGTCCGGAG GGCAGCGCAA GCGCGTGAGC GTCGCGCTGG AGCTGCTGAC CAAGCCTTCG CTGCTGTTCC TGGACGAGCC GACTTCCGGG CTGGACCCCG GCATGGACCG CTCCGTCATG CACTTGCTGC GCCGGCTCGC CGACGACGGC CGGACCGTGA TCGTGGTGAC GCACAGCGTC CTGAACCTCG AAGTGTGCGA TCGCCTTCTG GTGCTCGCGC CCGGCGGTCG CATCGCCTAC TTCGGGCCGC CAGCCGACGC CCTGACTTTC TTTGGTTTCG AGCAGTGGCC GGAGGCGTTC GAGGCCTTCG AGAACGATCA GGATCGCGAC TGGGCCGGGC GGTACCAGAC GTCGGGTACA TATCGGAAGT ACGTCGCCGG CACGATGGAG CACCAGCCCG CGCAGGCCGC GGTCGAGATC CGGTACGCCG AGCCGCCCAA GGCGCAGAGC TGGTTCGGCC AGCTGAGCAC GCTGGTGCGC CGGTACGTGG CGGCGCTGGC CGCCGACCGC ACGTTCCTGG CGGTCATGAT CATCCTGCCG TTCGTGATGG GCGCGATGGC GCGGGCGCTC GCCGGCAGCA AGCTCACCTC CGACACGGCG CTGAACGCGC TGCTCATCCT CTGCGTCGGC GGTCTGCTGG TCGGCGCGGC GAACGCGGTG CGCGAGCTGG TCAAGGAACG CGCCGTCTAT CGCCGGGAGC GAGCCGTGGG CTTGTCCCGG TCCGCGTATC TGTGGTCGAA GATCGTCGTG CTCGGCGCCA TCACCGTGGT GCAGGCCGTG GTGATGACGG TGATCGGGCT GGCCGGGGTG CGGATCAGGC CGGCCGGCGG CGGGGTGCTG ATGCCGCCGC TGATCGAGAT CGCGCTCGCC GTCGCGCTGC TGTCCTTCAC CGCGATGATG CTCGGGCTGC TCATCTCCGC CCTCGTGAAG AAGGAGGAGG TGACGATGCC GCTGCTGGTG CTGCTGGCGA TCATCCAGGT CGTCTTCTGC GGCGCGTTGC TGCAGCTGCA CAACGTCCCC GGCTTGAACC AGCTGTCCTG GCTCGTCCCC TCGCGCTGGG CGCTGGCCGC CATGGCGAGC ACGATCGACC TGCACCAGGT CGTCCCCGGC ACCCTGACCG CTGATCCGCT GTTCGCCCAC AAGACGAGCA CCTGGCTGCT CGACATGGGA GCCATGCTGC TGATGTCGCT GATCCTGGGC CTGGCGGTCG CTCGGCTGCT GCGCCGCCAC GAGCCGGCGA TCATGCGCCG GTGA
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Protein sequence | MADQPGAELV LQTEGDSRVM SPSREYQIGR DPLGDVVLTD PRVSWHHAVL HVDRGHWALD DVGSTNGTYD GQGHRVRHLE VGPGSMLRFG NPQDGPRASL LAVARPATPK KAARPSALTA ITGSYRQPTT VRPLPERTVR IGRALDNDLV VEDLSVSRSH AELRTRPDGR HEIEDLGSHN GTFLNGQPVL TAIVEPGDLI GIGHSVFCLV GDEIQEYVDT GEVALQVEGL SVQVGPEPRV LLDAVSFPVA EKSLLAVVGP SGAGKSTLLN ALTGMRPADR GSVRYDGRDL YQDYAELRQR IGLVPQDDIL HTQLGVRRAL SYAAELRFPG DTEKGERADR VEEVITELGL TQRADQVISS LSGGQRKRVS VALELLTKPS LLFLDEPTSG LDPGMDRSVM HLLRRLADDG RTVIVVTHSV LNLEVCDRLL VLAPGGRIAY FGPPADALTF FGFEQWPEAF EAFENDQDRD WAGRYQTSGT YRKYVAGTME HQPAQAAVEI RYAEPPKAQS WFGQLSTLVR RYVAALAADR TFLAVMIILP FVMGAMARAL AGSKLTSDTA LNALLILCVG GLLVGAANAV RELVKERAVY RRERAVGLSR SAYLWSKIVV LGAITVVQAV VMTVIGLAGV RIRPAGGGVL MPPLIEIALA VALLSFTAMM LGLLISALVK KEEVTMPLLV LLAIIQVVFC GALLQLHNVP GLNQLSWLVP SRWALAAMAS TIDLHQVVPG TLTADPLFAH KTSTWLLDMG AMLLMSLILG LAVARLLRRH EPAIMRR
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