| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7118 |
|---|
| Symbol | |
|---|
| ID | 8338485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8281005 |
|---|
| End bp | 8281547 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644960199 |
|---|
| Product | transcriptional regulator, ArsR family |
|---|
| Protein accession | YP_003117789 |
|---|
| Protein GI | 256396225 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4189] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAA AGCCGATACG CCGTATGGAC GTCCGTTCCC TCCGTGCCCT GGCTCATCCG
CTACGCATGG ACATCCTGGA CGTCCTCAAA GCCGACGGCC CCGCGACCTC GACAACCCTC
GCCGACCGCC TCGGCGAGAG CACCGGCACG CTCAGCTGGC ATCTGCGCCT GCTGGCCGAG
CACGGCTTCA TCGAGGAGGA CGTCGAGCGC GGCACCAAGC GGGAGCGATG GTGGCACGCG
GTGGAGGAGC GGCAGGTGCT CGATCCCGCG GACATGCCGG GGGAGCGGGC ACTGAGCATC
TATCTCGGAA CGATCGTGCG GCAGTGCTTC GAGCGGGCCG AGCGGTATGT CGCCGAGGAC
TGGAGTGAGG AGTGGCAGAG CGCTGCCACG CTTTCGGATT GGCAGGACCT GCAGCTCGCC
CCGGATCGGC TCGCCGCTCT CAATCGGGAT CTGTTCGCGG TCGTCGATCG GTACGTCTCG
GAGCCGCAGG ATCCTGATGG TGCGCCGGTG TCGGTCCAGA TCCAGTCCTT CCCGCGGAAG
TGA
|
|---|
| Protein sequence | MPAKPIRRMD VRSLRALAHP LRMDILDVLK ADGPATSTTL ADRLGESTGT LSWHLRLLAE
HGFIEEDVER GTKRERWWHA VEERQVLDPA DMPGERALSI YLGTIVRQCF ERAERYVAED
WSEEWQSAAT LSDWQDLQLA PDRLAALNRD LFAVVDRYVS EPQDPDGAPV SVQIQSFPRK
|
|---|
| |