| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7104 |
|---|
| Symbol | |
|---|
| ID | 8338471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8263993 |
|---|
| End bp | 8265381 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644960185 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003117775 |
|---|
| Protein GI | 256396211 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.999935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.409362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGAT GCGCCGCGGC CCGGCAGCTG TCTACGATCT TGGGCGTGGA GAAGAGACAA
CGCGGCCTGT GGCTGTCGGA CGGCCTGCTG GTGGTCGTCT ACCTCGTGCT GGTCGCGCTG
GTCACGCCGG CGCTGCGCGA GTTCCACACG ATCACGGACT ATCCGAACGG TTGGTACACC
CCGCTGGGCG AGCAGATCAT CCCGCCGGGC GGGTCGGTGA CCCAGTCGAC CTACCGCGCC
AACAACTGGC AGCAGCTCGA GCCGACGATC TTCACGATGA TCCTGGTGCC GATGCTGCGG
CGCCGGCCGC TGGTCTTCGC CAGCGCCGTC TGTGTCGGCC AGGGCCTGGT CGGCTCTGTG
CACGCCTCAG GCGACACCCG GTACGAGTTG CTCCTGGCGG CCGTCGCCTG CCTGGTGTCC
GTCGCGCTGG CCTGGCCGCG GCGCACGTCG CTGAAGGCCG CGGCGCTCAT CCTGGCCGGC
GCCGTGTTCT CGATGACTGC TTTCCCTCCC GGGTCCTCGG AGATGATGCA GACGCACGTC
GTCGTAGTCA CCCTGCTGAC CCTGGTGGCC TGGCTGATCG GCAGCTCGAT CCGCGAGCGC
CGGGCCGGCG CGGTCCGGCA GCGCGCCGAC GCCGCGGCGC AGGCGGTGGC GAACGAGCGC
CTGCGCATCG CCCGGGAGCT GCACGACATG ATCGCGCACA GCATCGGCAT CATCGCCATC
CAGGCCGGTA TGGGGAACCG CGTCATCGGC ACGCAGCCCG CCGAGGCGCA GAAGGCGCTG
CACGCGATCG AGGAGACCAG CCGGGACACG CTGTCCCAGT TGCGCCGGAC CCTCACCGCG
CTGCGCCACG GGGAGAACGC CGAGACCCCG ACCGACCCGG CGCCGGGCTT GGCCGACCTG
GACAAGCTCG TCGCCTCGAC GAAGCACGCG GGAGTCCTGG CGATCGTCGA GAGGATCGGC
ATCCCGCGGC CGCTGCCCGG CGAGATCGAC CTGGCGGCCT ACCGCATCGT GCAGGAGTCG
GTGACGAACG TGGTCCGCCA CTCCGGCGCC AGGACCTGCC GGGTCCGCAT CGAGTACCAG
GACAGCGCGG TGGCGATCGC CGTCTCCGAC GACGGCCACG GCGTCCTGGG CTCCGGCGGC
ACCGGCTTCG GCCTGGTCGG CATGCGCGAG CGGGTGACGC TGGTCCACGG CGCCTTCGAG
GCCGGTCCGC GCCCCGGCGG CGGGTTCCGG GTGTCCGCGA CGCTGCCGGT ACCGGGCGGG
TTCGAGACCA CCTACGGTGG GGCGAAGACG AACGCTGACA CCGGCACTGG CACTGGCACT
GGCACTGGCA CCGACCCCGA TCCCCGCGCG GACACCGCGC CTGACCCGAA CCCGGCGGTG
GCCTCGTGA
|
|---|
| Protein sequence | MSRCAAARQL STILGVEKRQ RGLWLSDGLL VVVYLVLVAL VTPALREFHT ITDYPNGWYT
PLGEQIIPPG GSVTQSTYRA NNWQQLEPTI FTMILVPMLR RRPLVFASAV CVGQGLVGSV
HASGDTRYEL LLAAVACLVS VALAWPRRTS LKAAALILAG AVFSMTAFPP GSSEMMQTHV
VVVTLLTLVA WLIGSSIRER RAGAVRQRAD AAAQAVANER LRIARELHDM IAHSIGIIAI
QAGMGNRVIG TQPAEAQKAL HAIEETSRDT LSQLRRTLTA LRHGENAETP TDPAPGLADL
DKLVASTKHA GVLAIVERIG IPRPLPGEID LAAYRIVQES VTNVVRHSGA RTCRVRIEYQ
DSAVAIAVSD DGHGVLGSGG TGFGLVGMRE RVTLVHGAFE AGPRPGGGFR VSATLPVPGG
FETTYGGAKT NADTGTGTGT GTGTDPDPRA DTAPDPNPAV AS
|
|---|
| |