Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7081 |
Symbol | |
ID | 8338448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8232129 |
End bp | 8232866 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644960162 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003117752 |
Protein GI | 256396188 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.642165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTGG TTCGCCGCCT ACTCGGCGAC GTGCTGCGCG GCCGACGGCA GCGCAGCGGA CGGACGCTCC GTCAGCTCGC CGCGACGGCA CGGGTGTCCC CCGGCTACCT CTCCGAGGTG GAGCGGGGAC AGAAGGAGCC CTCCAGCGAA TTGTTGGCCG CCATCTGCGA CGCGCTGGAA GTCAAGCTCT CCGACGTGTT GCTCGAACTG TCGACCGAAC TCGCCGCGGC CGAACTCGCC GCCGAGATCG AGGCCGCGGA GCTGGGCTCC CTGGTGCCCG CCGACCGTCG CACCCCGCAG CGGGTCGCGA TGCCGCCGGC GCGCAGCGGG CAGGCCGACG CCGCGCGCCA GGGCCAGAGC CAGGCCGGCT CCGGCCAGCG CTCCGGCGTG GTGGTCGGCG TGGGCGCCGG CGCCCCGCGC GGCACGCGCA CGATCCCGAC CGCGAAGATC CCGACCGCCG TGATCAACTC CCGGACCGCG GGCAACCGCC CCGGCAACAC CCGGCCGGCC TCCGGCTCGC CGCGGGTCGC TCCCAAGTCG GGTGCGGTAC CCCAGGCGAC CCGCGGTACG GGCATGGGCG CCCAGGGCTC GAGTCTGGCG ACCGGCCTCG GCCAGGCGCT GGGCCCGCAG CCCCCGATGG GTCCGCTGCC CTACGTCCCG GGCTCGCCGC TGCCGGGTCC GGAGAACCCC TACACGTTCG GCACGCCTCG GCTGCCCTCA CCGACGGGCC GGTCATAA
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Protein sequence | MILVRRLLGD VLRGRRQRSG RTLRQLAATA RVSPGYLSEV ERGQKEPSSE LLAAICDALE VKLSDVLLEL STELAAAELA AEIEAAELGS LVPADRRTPQ RVAMPPARSG QADAARQGQS QAGSGQRSGV VVGVGAGAPR GTRTIPTAKI PTAVINSRTA GNRPGNTRPA SGSPRVAPKS GAVPQATRGT GMGAQGSSLA TGLGQALGPQ PPMGPLPYVP GSPLPGPENP YTFGTPRLPS PTGRS
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