Gene Caci_7081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7081 
Symbol 
ID8338448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8232129 
End bp8232866 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content75% 
IMG OID644960162 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003117752 
Protein GI256396188 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.642165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTGG TTCGCCGCCT ACTCGGCGAC GTGCTGCGCG GCCGACGGCA GCGCAGCGGA 
CGGACGCTCC GTCAGCTCGC CGCGACGGCA CGGGTGTCCC CCGGCTACCT CTCCGAGGTG
GAGCGGGGAC AGAAGGAGCC CTCCAGCGAA TTGTTGGCCG CCATCTGCGA CGCGCTGGAA
GTCAAGCTCT CCGACGTGTT GCTCGAACTG TCGACCGAAC TCGCCGCGGC CGAACTCGCC
GCCGAGATCG AGGCCGCGGA GCTGGGCTCC CTGGTGCCCG CCGACCGTCG CACCCCGCAG
CGGGTCGCGA TGCCGCCGGC GCGCAGCGGG CAGGCCGACG CCGCGCGCCA GGGCCAGAGC
CAGGCCGGCT CCGGCCAGCG CTCCGGCGTG GTGGTCGGCG TGGGCGCCGG CGCCCCGCGC
GGCACGCGCA CGATCCCGAC CGCGAAGATC CCGACCGCCG TGATCAACTC CCGGACCGCG
GGCAACCGCC CCGGCAACAC CCGGCCGGCC TCCGGCTCGC CGCGGGTCGC TCCCAAGTCG
GGTGCGGTAC CCCAGGCGAC CCGCGGTACG GGCATGGGCG CCCAGGGCTC GAGTCTGGCG
ACCGGCCTCG GCCAGGCGCT GGGCCCGCAG CCCCCGATGG GTCCGCTGCC CTACGTCCCG
GGCTCGCCGC TGCCGGGTCC GGAGAACCCC TACACGTTCG GCACGCCTCG GCTGCCCTCA
CCGACGGGCC GGTCATAA
 
Protein sequence
MILVRRLLGD VLRGRRQRSG RTLRQLAATA RVSPGYLSEV ERGQKEPSSE LLAAICDALE 
VKLSDVLLEL STELAAAELA AEIEAAELGS LVPADRRTPQ RVAMPPARSG QADAARQGQS
QAGSGQRSGV VVGVGAGAPR GTRTIPTAKI PTAVINSRTA GNRPGNTRPA SGSPRVAPKS
GAVPQATRGT GMGAQGSSLA TGLGQALGPQ PPMGPLPYVP GSPLPGPENP YTFGTPRLPS
PTGRS