Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7080 |
Symbol | |
ID | 8338447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8230506 |
End bp | 8232014 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644960161 |
Product | GTP-binding proten HflX |
Protein accession | YP_003117751 |
Protein GI | 256396187 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.750227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGAAT CCCACAAGGA CGCTGCCCGC GACGAGGTCT ACGCATTGAA CGACCACGAC ACGCCGGAAG CCGAGTGGGA CACCGAGGAC GCCTTCGACG CGCCGGCCCC GCTCTACCGC AACCGGTGGG CCGACTCCCG GCACGACGGC GAGCAGTTCG ACCTGGAGGA GCGTGCCTCG CTCCGCCGCG TGGCCGGACT GTCCACCGAA CTCGAAGACG TCACCGAAGT CGAGTACCGG CAGCTGCGCC TGGAGCGCGT GGTCCTGGTC GGCGTCTGGA CCGACGGCAC CGCCGCCGAC GCCGAGGTGT CGCTGCGTGA ACTGGCAGCC CTGGCCGAGA CCGCGGGCTC GGAGGTGCTG GACGGGGTGA TCCAGCGCCG CGAGAAGCCG GACCCGGCCA CCTACATCGG CAGCGGCAAG GCCCTGGAGC TGCGCGACAT CGTGGTGGCC ACCGGCGCCG ACACGGTGAT CTGCGACGGA GAACTGAGCC CCGGCCAGCT GATCCACCTG GAAGACGTGG TCAAGGTCAA GGTCATCGAC CGCACGGCCC TGATCCTGGA CATCTTCGCC CAGCACGCCA AGTCCCGAGA GGGCAAGGCC CAGGTCGCCC TCGCGCAGAT GCAGTACATG CTGCCCAGGC TCCGAGGCTG GGGTCAGTCC CTGTCCCGCC AGATGGGTGG TGGCCGAGGC GGCCTGGCGA CCCGCGGACC CGGCGAAACC AAGATCGAAA CCGACCGCCG CCGCATCCGC GAACGCATGG CCAAGCTCCG CCGCGAAATC AACGACATGA GCAAGGGACG CGTGACCAAG CGCGCCGAAA GGCGCCGAGG CTCAGTCCCC TCAGTAGTCC TCGCCGGCTA CACCAACGCC GGCAAGTCCT CCATCCTCAA CCGCCTCACC GGCGCCGGAG TCCTCGTGGA GAACGCCCTG TTCGCCACCC TGGACCCCAC CGTCCGCCGC ACAGAAACAG CATCCGGCCG CGCCTACACC CTCTCCGACA CCGTCGGCTT CGTCCGCCAC CTCCCGCACC AACTGGTCGA GGCCTTCCGC TCGACCCTCG AAGAGGTAGG CGAAAGCGAC CTGGTCCTGC ACGTCGTAGA CGCCAGCGAC GAAGACCCCG AAGGCCAGAT CTCCGCGGTC CGAGCCGTCT TCGCCGACAT GGGCGCCGGC GACGTCAAAG AACTCATGGT CCTCAACAAA GCGGACCTGG CAGACCCCGA AGTCCTGGCC CGCCTCCTCC GCCACGAACC CCACAGCATC ATCGTCTCCG CCCGCACCGG CGAAGGCATC GACCACCTCC TCTCCGCCAT CGAACGCGAC CTCCCCCGCC CCGGCGTAGA ACTAGAAGCC CTAGTCCCCT ACGACCGAGG CGACCTGGTA GCCCGCATCC ACGCCGAAGG CGAAATGCTC AAAGAAGAAC ACACCGACCA CGGCACCCTA GTCCGCGCCC TGATCCACCA GAACCTCGCC GCGCAACTGG AGCCCTTCCG AACAGTGGGC GCGGTTTAG
|
Protein sequence | MTESHKDAAR DEVYALNDHD TPEAEWDTED AFDAPAPLYR NRWADSRHDG EQFDLEERAS LRRVAGLSTE LEDVTEVEYR QLRLERVVLV GVWTDGTAAD AEVSLRELAA LAETAGSEVL DGVIQRREKP DPATYIGSGK ALELRDIVVA TGADTVICDG ELSPGQLIHL EDVVKVKVID RTALILDIFA QHAKSREGKA QVALAQMQYM LPRLRGWGQS LSRQMGGGRG GLATRGPGET KIETDRRRIR ERMAKLRREI NDMSKGRVTK RAERRRGSVP SVVLAGYTNA GKSSILNRLT GAGVLVENAL FATLDPTVRR TETASGRAYT LSDTVGFVRH LPHQLVEAFR STLEEVGESD LVLHVVDASD EDPEGQISAV RAVFADMGAG DVKELMVLNK ADLADPEVLA RLLRHEPHSI IVSARTGEGI DHLLSAIERD LPRPGVELEA LVPYDRGDLV ARIHAEGEML KEEHTDHGTL VRALIHQNLA AQLEPFRTVG AV
|
| |