| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7070 |
|---|
| Symbol | |
|---|
| ID | 8338437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8215671 |
|---|
| End bp | 8217581 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644960151 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_003117741 |
|---|
| Protein GI | 256396177 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.459442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.449119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG AGCCCGATCC CCACCACGCC GTATCCCGGA CAGACTGGAC CCGCCGAGTG
CCCCCGCTTC CGCCGAACAT CCCCCAGCCG TCGAAGACCG ACCAGGCGCT GATCCGCAAC
TTCTGCATCA TCGCCCACAT CGACCACGGC AAGTCGACCC TGGCCGACCG GATGCTCCAG
CTCACCGGCG TGGTCGACGA ACGCGCCATG CGTGCGCAGT ACCTGGACCG GATGGACATC
GAGCGCGAGC GCGGGATCAC CATCAAGTCG CAGGCGGTCC GGCTGCCCTG GCAGGCCGAC
GACGGCAAGA CCTACATCCT GAACATGATC GACACCCCCG GGCACGTGGA CTTCACCTAC
GAGGTCTCGC GCTCGCTGGC GGCGTGCGAG GGCACGCTCC TGCTGGTCGA CGCCGCTCAA
GGCATCGAGG CGCAGACCCT GGCCAACCTG TACCTGGCCA TGGAGAACGA CCTGCAGATC
ATCCCGATCC TGAACAAGAT CGACCTGCCG GCCGCGCAGC CGGAGAAGTA CGCCGAGGAG
ATCGCCCGGC TGATCGGCTG CGAGCCCGAC GACGTGCTGC GGGTCAGCGC CAAGACCGGA
GTCGGCGTCG CGGACGTGCT CAACGAGGTC GTGCGCCGCG TCCCGGCGCC GGCCGGCGAC
CCGAACGGTC CGGCGCGGGC CGTGATCTTC GACTCGGTCT ACGACTCCTA CCGCGGCGTG
GTCACCTACG TCCGGGTCGT CGACGGCCAC CTGACCAAGC GCGAGCGCAT CGCGATGATG
TCCACCGGCG CCACCCACGA GCTGCTGGAG ATCGGCGTCA TCTCCCCGGA GCCGACCTCC
TCCCAGGGCC TGGCCGCCGG CGAGGTGGGC TACCTGATCA CCGGCGTGAA GGACGTGCGC
CAGTCCAAGG TCGGCGACAC CGTCACCACT CAGAACAAGG GCGCCCTGGA GGCTCTCGGC
GGGTACAAGG AACCCAAGCC GATGGTGTTC TCCGGCATCT ACCCGATCGA CGGCTCGGAC
TACCCGGAGC TGCGCGAGGC CCTGGACAAG CTGCAGCTCA ACGACGCGGC CCTGGTCTAC
GAGCCGGAGA CCTCCGCGGC GCTGGGCTTC GGCTTCCGCT GCGGCTTCCT GGGCCTGCTG
CACCTGGAGA TCATCCGCGA GCGCCTGGAC CGGGAGTTCA ACCTGGACCT GATCGCCACC
GCGCCGTCGG TGGTCTACCG GGTCGGGATG GAAGACGGCA CCGAGCACAT CGTCACCAAC
CCCTCGGAGA TGCCCGGCGG CAAGGTGATG TCGATCCACG AGCCGGTGGT GCGCGCGACC
ATCCTGACCC CGAACGACTT CGTCGGCGCG GTGATGGAGC TGTGCCAGAG CCGCCGCGGC
GCGCTGCTGG GCATGGACTA CCTGTCCGAG GACCGCGTCG AGATCCGCTA CACGCTGCCG
CTGGCCGAGA TCGTCTTCGA CTTCTTCGAC TCGCTGAAGT CCAAGACCCG CGGCTACGCC
TCGCTGGACT ACGAGCCCAC CAGCGAGCAG CAGGCAGACC TGGTGAAGGT CGACATCCTG
CTGCACGGCG AGACCGTGGA CGCCTTCTCG GCGATCGTGC ACAAGGACAA GGCGTACGCC
TACGGCGTGC GGATGACCGA GCGCCTGCGC GAGCTGATCC CACGCCAGCA GTTCGAGGTC
CCGATCCAGG CCGCGATCGG CTCCCGGGTG ATCGCCCGCG AATCGGTCCG CGCCATGCGC
AAGGACGTCC TCGCCAAGTG CTACGGCGGT GACATCTCCC GGAAGCGCAA ACTGCTGGAG
AAGCAGAAGG AAGGCAAGAA GCGCATGAAG ATGGTCGGCC GGGTCGAGGT GCCCCAGGAC
GCCTTCATCG CCGCGCTGAC CAATGAGACG GGTGACAAGG CCAAGAAGTA A
|
|---|
| Protein sequence | MNAEPDPHHA VSRTDWTRRV PPLPPNIPQP SKTDQALIRN FCIIAHIDHG KSTLADRMLQ
LTGVVDERAM RAQYLDRMDI ERERGITIKS QAVRLPWQAD DGKTYILNMI DTPGHVDFTY
EVSRSLAACE GTLLLVDAAQ GIEAQTLANL YLAMENDLQI IPILNKIDLP AAQPEKYAEE
IARLIGCEPD DVLRVSAKTG VGVADVLNEV VRRVPAPAGD PNGPARAVIF DSVYDSYRGV
VTYVRVVDGH LTKRERIAMM STGATHELLE IGVISPEPTS SQGLAAGEVG YLITGVKDVR
QSKVGDTVTT QNKGALEALG GYKEPKPMVF SGIYPIDGSD YPELREALDK LQLNDAALVY
EPETSAALGF GFRCGFLGLL HLEIIRERLD REFNLDLIAT APSVVYRVGM EDGTEHIVTN
PSEMPGGKVM SIHEPVVRAT ILTPNDFVGA VMELCQSRRG ALLGMDYLSE DRVEIRYTLP
LAEIVFDFFD SLKSKTRGYA SLDYEPTSEQ QADLVKVDIL LHGETVDAFS AIVHKDKAYA
YGVRMTERLR ELIPRQQFEV PIQAAIGSRV IARESVRAMR KDVLAKCYGG DISRKRKLLE
KQKEGKKRMK MVGRVEVPQD AFIAALTNET GDKAKK
|
|---|
| |