Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7032 |
Symbol | |
ID | 8338398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8174295 |
End bp | 8175677 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644960112 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_003117703 |
Protein GI | 256396139 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.440547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.761562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCCG ACAAGATCGA GACCATCGTC CGGCTCGCGA AGAGCCGAGG CTTCGTCTTC CCCTCCAGCG AGATCTACGG CGGTACGCGT GCCGCCTACG ACTACGGCCC GCTCGGCGTG GAGCTGAAGG AGAACATCAA GCGCCAGTGG TGGAAGGCCA TGGTCACCGG CCGGGAGGAC GTCGTCGGCC TGGACTCCTC GGTCATCCTG GCGCGCGAGG TGTGGGAGGC CTCCGGCCAC GTCAAGGAGT TCACCGACCC GCTCACCGAG TGCCAGTCCT GCCACAAGCG CTTCCGCGAG GACCACCTCA TCGAGGCCTA CGAGGCCAAG CACAACCGGG TGCCGGAGCG CGGCCTGGCG GACATCAACT GCCCGAACTG CGGGAACAAG GGCACGTTCA CCGAGCCCAA GGTCTTCAAC CTGATGCTCC AGACCCACCT GGGCGTCACC ATGGACGACG CGGGCCTGGC CTACCTGCGT CCCGAGACCG CGCAGGGCAT CTTCGTGTCC TACAAGACGG TCCGCGACGC CTCGCGCAAG AAGCCGCCGT TCGGCATCGG CCAGATCGGC AAGTCCTTCC GCAACGAGAT CACGCCCGGC AACTTCATCT TCCGCACCCG CGAGTTCGAG CAGATGGAGA TGGAGTTCTT CGTCAAGCCC GGCGAGGACG AGCAGTGGTT CGAGTACTGG CTCAACGAGC GCTACAACTG GTGGACCGAC CTGGGTCTGA AGCCTGAGAA CCTGCGCTTC TTCGAGCACC CGGCCGAGAA GCTGTCGCAC TACTCCAAGC GCACCGTGGA CATCGAGTAC CGCTTCAACT TCGGCGGCCA GGAGTTCTCC GAGCTGGAGG GTGTGGCCAA CCGCACCGAC TTCGACCTGA GCACGCACGC CAAGCACTCC GGCGAGGACT TCACCCAGCT GGAGCAGGAG ACCGGCGAGC GCTGGACGCC GTTCGTGGTC GAGCCGGCGG CCGGTGTGAA CCGCGGCATG CTCGCCTTCC TGCTCGACGC CTACGCCGAG GACGAGGCGC CGAACGCCAA GGGCCAGATG GAGGTCCGCA AGGTCCTGCG CCTGGACAAG CGCCTGGCGC CGGTGAAGGC CGCGGTCCTG CCGCTGTCCC GCAACGTCGA CCTCTCGCCC AAGGCCCGCG ACCTCGCGCA GCTGCTGCGC AAGAACTGGA ACGTCGAGTT CGACGACGCC GGCGCCATCG GCCGCCGCTA CCGCCGCCAG GACGAGATCG GCACGCCGTT CTGCATCACG GTGGACTTCG ACACCCTCGA CGACCAGGCC GTGACCGTCC GCGAGCGGGA CTCGATGGAA CAGCAGCGGG TCGCGCTGGA CCAGGTCGAG GGCTACCTCG CCGCGCGGCT GATCGGCGCC TGA
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Protein sequence | MAADKIETIV RLAKSRGFVF PSSEIYGGTR AAYDYGPLGV ELKENIKRQW WKAMVTGRED VVGLDSSVIL AREVWEASGH VKEFTDPLTE CQSCHKRFRE DHLIEAYEAK HNRVPERGLA DINCPNCGNK GTFTEPKVFN LMLQTHLGVT MDDAGLAYLR PETAQGIFVS YKTVRDASRK KPPFGIGQIG KSFRNEITPG NFIFRTREFE QMEMEFFVKP GEDEQWFEYW LNERYNWWTD LGLKPENLRF FEHPAEKLSH YSKRTVDIEY RFNFGGQEFS ELEGVANRTD FDLSTHAKHS GEDFTQLEQE TGERWTPFVV EPAAGVNRGM LAFLLDAYAE DEAPNAKGQM EVRKVLRLDK RLAPVKAAVL PLSRNVDLSP KARDLAQLLR KNWNVEFDDA GAIGRRYRRQ DEIGTPFCIT VDFDTLDDQA VTVRERDSME QQRVALDQVE GYLAARLIGA
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