Gene Caci_7016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7016 
Symbol 
ID8338382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8154089 
End bp8154550 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID644960096 
ProductDoxX family protein 
Protein accessionYP_003117687 
Protein GI256396123 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00519262 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCAACC TGAAGTCCGT GCCGGAGTAC GGCACCTCGC TCTTTCGGAT CGTCGTGGGC 
TTCCTCATGG CGTGCCACGG CGCCAGCAAT CTGTTCTCCT GGCCGGCGAA GGCCACCGGC
GGGCACACGG TGTCGCCGAC CGTGTGGCCC GGCGGAGTCG CCGCGCTACT GCAGTTCTCG
TTCGGGGTGC TGGTGATGCT CGGGGTGGTG ACGCGGGTCT CCGGCATCAT CTTGTCCGGG
ACGATGGCGT ACGCGTACTT CTCCGTGCAC GCCGAGAAGG CGCTGCTGCC GATCGCCAAC
GGCGGGGAGC CGGCGGCGAT GTTCTCCTGG GCGTTCCTCA TGATCGCGAT CGTCGGCGCC
GGTCCGCTGT CGGTGGACGC CGTGCTGGAG AAGGTGCGCC GAACGTCCCC GGCGATGGTC
GTGTCCGAGC CGGAGGGCGC GCCCGCCGTC GCCACGGCTT GA
 
Protein sequence
MRNLKSVPEY GTSLFRIVVG FLMACHGASN LFSWPAKATG GHTVSPTVWP GGVAALLQFS 
FGVLVMLGVV TRVSGIILSG TMAYAYFSVH AEKALLPIAN GGEPAAMFSW AFLMIAIVGA
GPLSVDAVLE KVRRTSPAMV VSEPEGAPAV ATA