| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7003 |
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| Symbol | |
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| ID | 8338369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8128338 |
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| End bp | 8133851 |
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| Gene Length | 5514 bp |
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| Protein Length | 1837 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644960083 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003117674 |
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| Protein GI | 256396110 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.185251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.018341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA CCGAGGACAA GCTCCGCGAC TACCTCAAGC GCGTCACCGT CGACCTCACC
GAGGCCCGGC GGCGGCTGGA GGAGTCCGAG AACGCACGCC GCGAACCGAT CGCGATCATC
GGCGCGGGCT GCCGCTTCCC CGGCGGGGTG AGCACCCTGG AGGGACTGTG GGAGACGGTG
CGTTCGGGCA CTGACACGAT CACCGGCTTC CCGACGAACC GCGGCTGGGA CACCGACGGT
CTCTACGACC CGGACCCCGA GGCGCCGGGA CGCACCTACA CCCGCCACGG CGGCTTCCTG
CACGACGCCG CCGACTTCGA CGCCGAGTTC TTCGGCATGA ACCCGCGCAG CGCGCTGGCC
ACCGACCCGC AGCACCGCCT GTTCCTCGAG ACGGCGTGGG AATCCTTTGA GCGCGCAGGG
ATAGTGCCCG GCTCGCTGCG CGGCAGCAAG ACCGGCGTGT TCGCCGGGAC CATGCACAAC
GACTACGCGA TGCGCTACAT CAACGCGCAC CCCGCCGAGC TGGAGGGCGC GTTCCTGCTC
GCCAACGCGC CGAGCGTCCT GGCCGGGCGG CTGTCCTACA CCTTCGGGCT GGAGGGTCCC
GCGCTGACGC TGGACACGGC GTGCTCCTCC TCGCTGGTCG CGGTGCACCT GGCGATGCGG
GCGCTGCGCG ACGGCGAGTG CTCGCTGGCG CTGGCCGGCG GCTCGACGGT GATGTCGACC
ACTGATTCGT TCATCGAGTT CTGCCGGCAG CGCGCGCTGT CCGCCGACGG CCGATGTCGT
CCGTTCTCGG CGGATGCCGC CGGTGCCGCG TGGTCCGAAG GCGTCGGCGT GCTGTTGTTG
GAACGCCTTT CGGACGCCCA ACGCAACGGC CGACGGATCC TCGCGGTGAT CCGGGGGAGC
GCGGTCAACC AGGACGGCCG CAGCAACGGG ATGACGGCGC CGAACGGTCC CGCGCAGGAG
CGCGTCATTC TGGCGGCCCT GGCCGACGCC GGTCTCGACA CCGCCGACGT GGACGCCGTC
GAGGCACACG GCACGGGCAC GCCGCTCGGC GACCCGATCG AGGCGCGGGC ACTGGTGGCG
ACGTACGGCC GCGGCCGCAA GACCGACGAC CCGCTGTGGC TGGGCGCGTC GAAGTCGATC
TTCGGGCACA CCCAGGCAGC GGCAGGGCTC GCCGGAATCC TCAAGATGGT CATGGCGATG
CGGCACGGGG TGCTGCCGCC GACGCTGCAC GCCGAGGTGC TCAGTCCGCA CGTGGACTGG
GACGCGGAGG CGCTGAGCCT GGTCACCGCC GAGCAGGAGT GGACGCGGCG CGGCGGGCCG
CGGCGGTGCG GGGTGTCGGC GTTCGGGCTG AGCGGGACGA ATGCGCATGT GGTGCTGGAG
GAGGCGCCGG ATGCTGCTGC TTCGGCGGCT TTGGTTTCTG GGCACGGCGG TCCGCTGGCT
TGGGTTATCA GTGCTCGGAC TCCTGCCGCT TTGCGCGGTC AGGCTGAGCG GCTGCGGTCG
TTCGAAGACA CCGAGCCGCA TGACGCCGGT GATGTCGCGC GGGCGTTGGT GTCGACGCGA
GCGCTGTTCT CGCATCGGGC CGTGCTGCTC GGCGACGACC GGGACGCGCT GCTCTCCGCG
CTCGACGACT ACGTGGCCGG GCGACCGAAC CGGGACGTGG TTACTGGCGT GGCGCCGGAT
CACGCTCCGC GTGCCTTCCT GTTCACCGGT CAGGGCGGTC AGCGCGCCGG AATGGGACGC
GAGCTTCACG CGGCGTTCCC GGTTTTCGCC GCAGCCTTCG ACGAGGTCTG CGACGCCCTC
GACCCGCACC TCGACCGCCC GTTGAAGGAC GTGGTCTTCG CCGCGCCGGA CAGCCCGGAT
GCCGCGCTGA TCGATCAGAC GCGGTACACG CAGCCGGCTT TGTTCGCGTA CGAGGTCGCC
GCTTTTCGGC TGCTCGAGTC GTTCGGTATT GCGCCGGATT TCGTCGCGGG GCATTCGATC
GGCGAGTTCG CGGCGGCGTT CGTCGCCGGG GTCTGGTCGC TGGCGGACGC GGCGCGGTTG
GTCGTGGTCC GGGCGGCGCT GATGCAGGGC CTTGATGCCG CCGGCGCGAT GGTCGCGGTC
GAGGCTTCGT TCGATGAGGT CGCGGCGTCG CTGGTCGGGC TGGAGGACGC GGTGGCGGTG
GCTGCCGTGA ACAGTCCGAC GTCGGTGGTG CTGTCCGGCG AGGAGAAGGC GTGCCTGCGG
CTGGCGGAGC AGTGGCAGAC CGCCGGTCGG CGGACGCGGC GGCTGGCGGT CAGCCACGCG
TTCCACTCGC CGTTGATGGC GCCGATGCTC GATGCGTTCC GGGCGGAGTT GGCTCGCGTG
GAGTTCGCCG CGCCTCGGTT GGCGCACGCG ACGAATCTGG GTCCTGATGG TTCTGGTGGA
CCGGATTGGG ACGAGCCGGA GTACTGGGTG CGGCAGGTGC GCGAGACCGT CCGGTTCGAG
GAGACGGTTG ACGCGCTGGT CGCGCAGGGT GCGGCGGTGC TGATGGAGGT CGGGCCGGAC
GCTGTCCTGG CTGGGCTCGC GCAGGGGTGT CCCAGCGCTG CCGATGTGCG GGTCGTTGCT
TTGCAGCATC GGAAGCGCGC GGAGGTTGAG GCGCTGGTTG GCGCGCTGGC GCAGGGATGC
GTGGCGGGCG TCGGGGTGGC GTGGGACGCG TTGTTCGGGC CGGTGTCCGG CGTGCCGTCG
TTCGACCTGC CGCTGTACGC CTTCGACCGG ACGCGGTACT GGCTGCCGCC GCGTCCGCGT
GAGGCGCAGG TGGAGTCGGT GGGTCAACGT GCTCTGACAC ACCCGCTGCT CGGTGCGGCG
GTCGAGGTCG GGGACGACGG CGCGCTGGTG CTGACCGGGC GGTTGGCGGC GGCGGAGCTG
CCGTGGCTGG CCGACCACCG GGTGGCCGGC GCCGAGCTGG TGCCCGGGAC GGCGGTGCTG
GACGCGGTGC TGGTGGCCGC CGAGCGCGCG GGGTGCGAGC GCGTCGAGGA GCTGGTGTTC
GAGGCGCCGA TCGTGCTGCC GCCGAGCGGG GTGCTGTTCG TGCAGATCGC GGTGGACGCC
GAGCGGGGCG TTCGGGTCTA CACGCGCGGC GCCGAGGACG AGGTGTGGAC GCGGCGGGCC
AGCGGCCGGC TGGGTTCCTC CGGCACAGGT GTCGCAGAAG TCTGCGACTG GGCAGTCTCC
TGGCCGCCGT CCGGGGCGTC CGAAATCGAC GCCGAACGTG GCTACGACCG GCTCGCCGAT
CTCGGCTACG AGTACGGCCC GGCGTTCCGC GGCGCGGTGC GCGTGTGGCG CCGCGAGACC
GAGCTGTTCG CGGAGGTCGC AGCGCCCGAG GGGCTGGACC TCAGCGGCTT CGGCCTGCAT
CCGGCGCTGC TCGACGCGGC GTTCCATCCC ATGCTGCTGA CCGCCGACGA GACCGAGCCG
CGGGTGCCTT TCCTGTTCCG GGGCGCTCGG CTGACGGCGA CGGGCGCCTC GGCGCTGCGC
GTGCGGCTCA CGGTGGCGGG CGACGAGGTT ACGGTCGCGG TCGCCGATCT GTCCGGTAAC
CCAGTCTTCG GCATCGACGC CGTGGTGGTC CGCGCGGCGC CCGCGAGTGC GATGGCTGCT
GCCGGGCCGA CGCCTTACGT CGTCGAGTGG ATCGACGCCA CCCCGACCGC ACGCAGCACG
CCCGACCCCA CCACGCTGGT GATCCCCGCA GTCATCGCGC CTGACACAGA CCCGATGCTT
GCCGTCCGCG AGGCAACGAC CTCGGCACTG GCAACAATCC ACCAAACCAT CGAATCGTCG
AGCCGCGCGG TCTTCCTCAC GCATAACGCC TTCAACGGCT CTCTCGCCGA CGCCGCAGTA
TGGGGTCTGA TTCGCACGGC TCAGGCAGAG AATCCTGGCC GATTCGTACT GGCCGATGTG
CCACTCGGGT TCGACGACTG GGGTCTGCTG GCCGCGTGCG ACGAGCCACA GGTACGGATC
GCCGACGGCC GCGTCTCCGT CCCGCGCCTG GTCCGCCACA CACGTACCGA CGCCGACACC
GACACCGGGA CCGCGTCCCT GCCGGACGGC CCAATCCTCA TCACCGGCGG CACCGGCGGC
CTCGGCGCCC TGATCGCCCG CCACCTGGTC GAACACCACG GCGTCAGCGA ACTGATACTG
GTCTCCCGCA GCGGCACCGA CGCCCCCTCC GCCCCCGCCC TCCGCGAACT CGGCGCACAG
GTCACCATCA CCGCCTGCGA CGTCGCCAAC CGCGAAGCCC TCACCAAACT CCTGGCAGAA
CACCCGCACC TCGCCGCAAT CATCCACACC GCAGGCATCC TCGACGACGC AACCCTCACC
ACCCTCACCC CCACCCGCAT CGACGCAGTC CTGCAACCCA AACTCAACGC CGCCTGGCAC
CTCCACCAAC TCCGCCCCCA CACCCCCCTG ATCCTCTTCT CCTCCCTAGC CGGCACCCTC
GCCAACCCCG GCCAAGCCAA CTACGCAGCA GCCAACGCAG CCCTCGACGC CCTGGCAACC
CACCGCCGCA CCCAATCCCA ACCAGCAACA TCAATAGCCT GGGGCCTCTG GCCCACCCCC
ACCGGCATGA CCACCACCCT CACCCCCACA GAACAAACCC GCCTCACCCA ATCCGGCCTA
ACCCCCCTCA CCACCCCCGA AGCCCTCACC CTCTTCGACA CCGCCCTAGC CGAAGCCTGC
GCCCTCGCCC CCAGCGCGAC TCAGGCCACT GAGCCAGGTT CCCCCAGTGC GAGCATGGCC
TCCGCACCCA GTGCGCCCGC AGAAGCCACT GTGCTCAGCT CGAGCGCCGC ACCCAGTGCG
CACACCCCCG GCGCCGCCTC TGCATCCAGC GCTCCGAGCG CCTTCGCCGA AGCTGCTACT
GCGGCCGCAT CTGGTGCAGA TGTCTCGGCA TCGCACACGG CTACTCTCAT CGCGGCCACG
TTCCACCTCC CCGGCCTCCG CGCACGCGCC GAAGCCGGCA CTCTGCCGCC GATCCTTCAA
GCTTTGGTCC CTGCGCGCCG CAAGCCAGCC ACTGCCACCG CCGCACCCGC ACTCCGCACC
CGCCTCGCCG CCCTTCCCGA GCCGCAGGCC AAGCAGGCGC TCGTCGACCT GGTCCGCGCG
CACGTCGCCG CCGTCCTTGG CTACGCCGGT CCGGCCTCCG TCGACCCCGA TCGGGCCTTC
GCTGAGCTCG GCTTCGACTC GCTCACCGCC GTCGAGCTGC GCAATCGCCT TGAGGCCGAC
ACCGGCTTGA GTCTGCCTCC GGCGTTGGCC TTCGACCACC CGACCGTCGC CGCTGTCGGC
GCGCACCTGT TCGTCGAGCT CGCGCCTGCC GCGCCGGATC CGCATCAGGC TCTGCGTGCC
GCGCTCGCTG AGGTCGAGGA CTTGGTGCTC GCACGGCCTG ATCCGGCGCT CGCCGAGTTG
GTCGCCGCCA CGCTTGCGCG CCTGACTGCT GGGTCCGCCG GCGATGGCGT CGAGCAGCGC
ATCAACGACG CCAGTGATGA AGAGATCTTC GCCTTCATCG ACAACGAACT CTGA
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| Protein sequence | MATTEDKLRD YLKRVTVDLT EARRRLEESE NARREPIAII GAGCRFPGGV STLEGLWETV
RSGTDTITGF PTNRGWDTDG LYDPDPEAPG RTYTRHGGFL HDAADFDAEF FGMNPRSALA
TDPQHRLFLE TAWESFERAG IVPGSLRGSK TGVFAGTMHN DYAMRYINAH PAELEGAFLL
ANAPSVLAGR LSYTFGLEGP ALTLDTACSS SLVAVHLAMR ALRDGECSLA LAGGSTVMST
TDSFIEFCRQ RALSADGRCR PFSADAAGAA WSEGVGVLLL ERLSDAQRNG RRILAVIRGS
AVNQDGRSNG MTAPNGPAQE RVILAALADA GLDTADVDAV EAHGTGTPLG DPIEARALVA
TYGRGRKTDD PLWLGASKSI FGHTQAAAGL AGILKMVMAM RHGVLPPTLH AEVLSPHVDW
DAEALSLVTA EQEWTRRGGP RRCGVSAFGL SGTNAHVVLE EAPDAAASAA LVSGHGGPLA
WVISARTPAA LRGQAERLRS FEDTEPHDAG DVARALVSTR ALFSHRAVLL GDDRDALLSA
LDDYVAGRPN RDVVTGVAPD HAPRAFLFTG QGGQRAGMGR ELHAAFPVFA AAFDEVCDAL
DPHLDRPLKD VVFAAPDSPD AALIDQTRYT QPALFAYEVA AFRLLESFGI APDFVAGHSI
GEFAAAFVAG VWSLADAARL VVVRAALMQG LDAAGAMVAV EASFDEVAAS LVGLEDAVAV
AAVNSPTSVV LSGEEKACLR LAEQWQTAGR RTRRLAVSHA FHSPLMAPML DAFRAELARV
EFAAPRLAHA TNLGPDGSGG PDWDEPEYWV RQVRETVRFE ETVDALVAQG AAVLMEVGPD
AVLAGLAQGC PSAADVRVVA LQHRKRAEVE ALVGALAQGC VAGVGVAWDA LFGPVSGVPS
FDLPLYAFDR TRYWLPPRPR EAQVESVGQR ALTHPLLGAA VEVGDDGALV LTGRLAAAEL
PWLADHRVAG AELVPGTAVL DAVLVAAERA GCERVEELVF EAPIVLPPSG VLFVQIAVDA
ERGVRVYTRG AEDEVWTRRA SGRLGSSGTG VAEVCDWAVS WPPSGASEID AERGYDRLAD
LGYEYGPAFR GAVRVWRRET ELFAEVAAPE GLDLSGFGLH PALLDAAFHP MLLTADETEP
RVPFLFRGAR LTATGASALR VRLTVAGDEV TVAVADLSGN PVFGIDAVVV RAAPASAMAA
AGPTPYVVEW IDATPTARST PDPTTLVIPA VIAPDTDPML AVREATTSAL ATIHQTIESS
SRAVFLTHNA FNGSLADAAV WGLIRTAQAE NPGRFVLADV PLGFDDWGLL AACDEPQVRI
ADGRVSVPRL VRHTRTDADT DTGTASLPDG PILITGGTGG LGALIARHLV EHHGVSELIL
VSRSGTDAPS APALRELGAQ VTITACDVAN REALTKLLAE HPHLAAIIHT AGILDDATLT
TLTPTRIDAV LQPKLNAAWH LHQLRPHTPL ILFSSLAGTL ANPGQANYAA ANAALDALAT
HRRTQSQPAT SIAWGLWPTP TGMTTTLTPT EQTRLTQSGL TPLTTPEALT LFDTALAEAC
ALAPSATQAT EPGSPSASMA SAPSAPAEAT VLSSSAAPSA HTPGAASASS APSAFAEAAT
AAASGADVSA SHTATLIAAT FHLPGLRARA EAGTLPPILQ ALVPARRKPA TATAAPALRT
RLAALPEPQA KQALVDLVRA HVAAVLGYAG PASVDPDRAF AELGFDSLTA VELRNRLEAD
TGLSLPPALA FDHPTVAAVG AHLFVELAPA APDPHQALRA ALAEVEDLVL ARPDPALAEL
VAATLARLTA GSAGDGVEQR INDASDEEIF AFIDNEL
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