Gene Caci_6997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6997 
Symbol 
ID8338363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8100103 
End bp8101017 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID644960077 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003117668 
Protein GI256396104 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCC ACGTGATCAT CGGCGCCGGC GCCACCGCGC TGGCCACCGC CCGCCTGCTC 
GCCGAGGACG GTGAACAGGT CCGGCTGGTC AGCAGGCGCG GCACCTCAAC GCCGCACGAA
CGGGTCGAAC CCGTCGCTCT GGACGCGACG GACGCCGACG CGCTGACCGA GATCTGCCGG
GGCGCGGCGA CGGTGTTCAA CTGCGCGATG CCCGCGTACC ACACGTGGCC GCTGGCTCTT
CCGCCGTTGT TCCGAGCGAT CCTGAGCGCG GCAGAACGTG GCGGGGCGCG CTATGTGATG
CTGGGCAATC TTTACGGGTA CGGGCCCGTG CGGGGTCCGG TGACCGAGGA CCTGCCGTTG
CTCGCAACAG GCCCGAAAGG CGTTGTCCGG GCTCAGATGT GGCAGGAGGC CCTGGCGGCG
CACGAGGCCG GACGGGTCCG CGCGGCCGAA GTACGCGCGG GACAGTTCCT CGGCGCGGGC
GCCGTCTCTT CCTTCACTCT GACCGTCGCG CCCGCCGTGC TCGCCGGGCG GCTGGCGCTG
ACTCCGGCGG CCCTGGACAC CACCACCGGC TACACCGCGG TGGGCGACGC CGCGCGTGCT
CTCGTCGGCG TCGCGCGGGC GGAGGACGCC TTCGGCCAGG CGTGGCATGC GCCGGCCGGC
AACGCCACGG TCCGGGAACT CGCCACGCTG CTGGCGAAGC TGGCCAGCGC GCCCGCCCCG
CAGCTTGAGA CGCTGACAGA GCGAGACACC GCCCTGCTGT CGTTGACCTC GCCGCTCTGG
GCGGAATTCG AGGAGACCGC CCACATGTCG CACCAGGACT TCGTGGTGGA CTCCCGCCGG
ATCCAGCGAC GGTTCGGGCT CGCGCCGACT CCCGTGGAGG AGGTACTCGC CGCGCCGCGT
TCGGGTGCGA GCTGA
 
Protein sequence
MPFHVIIGAG ATALATARLL AEDGEQVRLV SRRGTSTPHE RVEPVALDAT DADALTEICR 
GAATVFNCAM PAYHTWPLAL PPLFRAILSA AERGGARYVM LGNLYGYGPV RGPVTEDLPL
LATGPKGVVR AQMWQEALAA HEAGRVRAAE VRAGQFLGAG AVSSFTLTVA PAVLAGRLAL
TPAALDTTTG YTAVGDAARA LVGVARAEDA FGQAWHAPAG NATVRELATL LAKLASAPAP
QLETLTERDT ALLSLTSPLW AEFEETAHMS HQDFVVDSRR IQRRFGLAPT PVEEVLAAPR
SGAS