Gene Caci_6989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6989 
Symbol 
ID8338355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8087968 
End bp8088720 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID644960069 
Productprecorrin-6x reductase 
Protein accessionYP_003117660 
Protein GI256396096 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.463236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.655339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAC TCATCCTGGG CGGCACGGCG CAGGCGCGCG AACTCGCCGC CGAGCTGTGT 
GCCCGGGACG AGCACCGGAT CATCCTCTCG CTTGCCGGCC GGACCGGCGA AACGGCCCTG
CCGGTCCCGT CCGGCAGCCG GTTGCGGGTC GGCGGCTTCG GCGGCGCCGA CGGGCTCGCC
GCATACCTGC GCAGCGAGTC GATCGACGTG CTCATCGACG CCACGCACCC CTTCGCCGGC
GCGATCTCCG AGAACGCCGC CGCGGCTTCG ATCGAGTCCG GAATCCGGCT GCTGGCCTTG
CGCCGCCCCC CGTGGCAGGC GCGCCCCGGC GACCGGTGGA CTCACGTTCC GGACGTGGTC
ACCGCAGCCG CGCACGCCGC CAAGTTGGCC GATGGCCTCT GTGTATTCGT CACGACCGGT
CGTCTCGAAG CGCGCGCCTA CGCCAGTGAT CAACAGCACA CCTATCTGAT CCGCACGGTC
ACCGCGCCCG ACGGTCCGCT GCCGCCGCAT CACACTCTCG TCTTCGATCG CGGGCCCTAC
ACCGTCGCCG GCGAAACCGA GCTCATGGCA CGCCATGACG TGGCGGCCCT GGTCACCAAG
AACAGCGGCG GCACGTCCAC CTCGGCGAAA CTCACCGCCG CCCGGCAGCG AGGGATCCCG
GTCATCATGG TGGACCCGCC TGCGCTGCCG GCTTCGGGTG AGGTGTACTT CGAGGTTGCT
GAAGTCGTCA GGCAGGTAAT CGCGATCACC TGA
 
Protein sequence
MRILILGGTA QARELAAELC ARDEHRIILS LAGRTGETAL PVPSGSRLRV GGFGGADGLA 
AYLRSESIDV LIDATHPFAG AISENAAAAS IESGIRLLAL RRPPWQARPG DRWTHVPDVV
TAAAHAAKLA DGLCVFVTTG RLEARAYASD QQHTYLIRTV TAPDGPLPPH HTLVFDRGPY
TVAGETELMA RHDVAALVTK NSGGTSTSAK LTAARQRGIP VIMVDPPALP ASGEVYFEVA
EVVRQVIAIT