Gene Caci_6987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6987 
Symbol 
ID8338353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8086064 
End bp8087047 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content66% 
IMG OID644960067 
Productprotein of unknown function DUF344 
Protein accessionYP_003117658 
Protein GI256396094 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.839871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTCCG CTGCCACCGA CGAGCCCGAC GACCGCAACG ACCCCGATGA CCGGGAGCGT 
GCGTGGACGC TCGCCGACGT GACCGACATC GGCGGTCTGC GCATCGAGCA GGCGGACGAC
GACGATCCGA TCCTCATAGG CGCCGACGGC GTGCCGATCG ACACCTGGCG CCAGGACTAT
CCGTACCGCG AACGCCTGGA CCGTACGCGC TACGAGCACG ACAAGCGGCT GCTGCAGATC
GAGTTGCTGA AGCTCCAGAA CTGGATCAAG GACACCGGCG GCCGTCTGGT GATCCTGTTC
GAGGGCCGCG ACGCAGCCGG CAAAGGCGGC ACGATCAAGC GCTTCACCGA GCACCTCAAC
CCCCGCGGCG CCCGAGTGGT CGCCCTGGAG AAGCCCACCG AGCGCGAACG CACCCAGTGG
TATTTCCAGC GCTACGTGAC GCACCTCCCC GCAGCCGGCG AGATCGTGAT GTTCGACCGC
TCCTGGTACA ACCGAGCCGG CGTCGAACGC GTCATGGGCT TCTGCGACCC GGCCGAGTAC
CTGGAGTTCA TGCGCCAGGC GCCCGAATTC GAGCGCATGC TCGTCCGTGA CGGCATCACC
CTGGTGAAGT TCTGGTTCTC CGTCTCCCAA GCCGAGCAAC GCACCAGATT CCTGATCCGC
CAGGTAGACC CCGTCCGCCA GTGGAAGCTG AGCCCCATGG ACCTCGCCTC CCTAGAACGC
TGGCAGCTCT ACACCGACGC CAAGGAAGCG ATGTTCTTCT ACACCGACAC CGCCGACGCC
CCCTGGACAG TCATCAAGAG CAACGACAAA AAGCGAGCGC GCCTAGCCGC CATGCGACAC
GTCCTCTCCC TGTTCCCCTA CGCGAACAAA GACCTTGAAA TCGCCCAGCT CCCCGACCCC
GAAGTCCTCG GCTCCGCCGC CCTCCTCGCC GAGCGCAGCG ACGCTGACCC GCAACGGGTT
CTGCCGCGCC TGTCTAGCGG CTGA
 
Protein sequence
MPSAATDEPD DRNDPDDRER AWTLADVTDI GGLRIEQADD DDPILIGADG VPIDTWRQDY 
PYRERLDRTR YEHDKRLLQI ELLKLQNWIK DTGGRLVILF EGRDAAGKGG TIKRFTEHLN
PRGARVVALE KPTERERTQW YFQRYVTHLP AAGEIVMFDR SWYNRAGVER VMGFCDPAEY
LEFMRQAPEF ERMLVRDGIT LVKFWFSVSQ AEQRTRFLIR QVDPVRQWKL SPMDLASLER
WQLYTDAKEA MFFYTDTADA PWTVIKSNDK KRARLAAMRH VLSLFPYANK DLEIAQLPDP
EVLGSAALLA ERSDADPQRV LPRLSSG