| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6981 |
|---|
| Symbol | |
|---|
| ID | 8338347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8077932 |
|---|
| End bp | 8079101 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644960061 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003117652 |
|---|
| Protein GI | 256396088 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.69549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.8933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGG CCTCGCAGCC CACCGACCGG AGCCAGTTGC GCAGACTCCA TCTCTGGTAC
TCCGCGCTCT GGTTGGTCTT CGGCCTGGTC CCCCCGGCGA TCGCCATGGT GGTGGACCTG
CCGGCCGAGA CGAAGTCCTG GTCGTTGGCG CTGCTGGCCG TGCTCGGCCT CTGCTATGCG
GCCGTCAGAT TCGTCCCCGG CAATCTCGTC CTGCGCCCGC AGGCTTTCCT CGCCCTGCTC
GCGATCGGCC TGGGCGTTCA GGCGTACGTG CTGAAGGGAG GCGCCGCGAT GTTCATCATC
TCCCTTCCGC AATTCTGGAT CCTCGCCGCA GGACCACGGC GGGCGATCGC TCTCAGCGGC
GCCGCGGCGC TGGCATGCCT CGCCGGCGGA GCGGCCGCCG GCGCGTTCCT CACCGGCAAC
ACGGTCTTCA CCTGCATCGG GTACGCCGCC GGCGTCCTGA TCGGCCTGTT GATGAACTGG
TATATCCGGC AGAGCGACGA GCGCGCCCGC CGCCTGAGCG CGGAGCTGGA GGAGACCCAG
CGGCAACTGG CCGAGGCCAA CCGCCGCGAG GGCGCCGCGC AAGAGCGCCA ACGGCTCGCC
CGGGAGATCC ACGACACCTT GGCCCAGGGC TTCGCGTCCA TCATCGTGCT GGCCGAGGCC
GCCCGCGCGG GTATCGCTGC GAGCCCGGCG AAGAGCTCCC AGCAGTTGCT GTCGATCGAA
CGCACCGCCC GCGAGAACCT CGCCGAGGCA CGGGTCCTGG TCGGCTCGGC TCCGCACGTC
GTGCAGGGCT CGGTCGCCCA GAGCCTGCGC CGGACCCTGG ACCGTTTCGT GGAGGACACC
GGGCTCGCCG TCAGCGCGGA GCTGCCGGAC ATCGAGTGCG ACCAGCAGAC CCGGATCGCG
CTGCTGCGCT GCACCCAGGA ATCGCTGGCC AACGCCCGCA AACACGCCGC CGCCTCGACC
ATCGGCGTCG TCCTCACGCC GCATCCGCAC GGCATCGAGC TGGAGATCAC CGACGACGGC
CGCGGCTTCG TCGTCGGCCG CTCCCGGGGC TTCGGCCTCG ACGGCATGCG CAAGCGCCTC
GCCGACCTCG GCGGCGAGCT CACCGTCACC AGCTCGCCGG GCGACGGCAC CCGCGTCCTC
GCCATGATTC CCACGAACGA TCAGGGGTGA
|
|---|
| Protein sequence | MITASQPTDR SQLRRLHLWY SALWLVFGLV PPAIAMVVDL PAETKSWSLA LLAVLGLCYA
AVRFVPGNLV LRPQAFLALL AIGLGVQAYV LKGGAAMFII SLPQFWILAA GPRRAIALSG
AAALACLAGG AAAGAFLTGN TVFTCIGYAA GVLIGLLMNW YIRQSDERAR RLSAELEETQ
RQLAEANRRE GAAQERQRLA REIHDTLAQG FASIIVLAEA ARAGIAASPA KSSQQLLSIE
RTARENLAEA RVLVGSAPHV VQGSVAQSLR RTLDRFVEDT GLAVSAELPD IECDQQTRIA
LLRCTQESLA NARKHAAAST IGVVLTPHPH GIELEITDDG RGFVVGRSRG FGLDGMRKRL
ADLGGELTVT SSPGDGTRVL AMIPTNDQG
|
|---|
| |