Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6977 |
Symbol | |
ID | 8338343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8071869 |
End bp | 8074562 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644960057 |
Product | hypothetical protein |
Protein accession | YP_003117648 |
Protein GI | 256396084 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.449457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.690746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA ACGTTTCCGA CCGCGCCAAC GCCGGCGACC CCGGCGACGC GAGCGGTGCG CACACCAAGC CTGTCGACGC CTCGCGACGG GAGGTGTTCC GCTGGCTCGG TGCGGCAGCC GCCGTCGTCG GCGCCGGCGG AGCCTTTGCG ACGGCCACTC CGGCACAAGC CGCTGCCTCA CGAAGGCTGG CCACCGGCTC GAACGCACGC CTGTCGACCG CGGCGGTCAA CGCCCCGCTG CCGGCGGCGA GTCCCGCGGC GTCGACCTTC GCGCCGCTGC GGCCGCCGGC GACGCCGCTG GCCGTGCGGT CGCCGTATCT GAGCACCTGG CAGGCTTCTG ACACCCTGAC CGGGACCTGG TCGACGTTCT GGAACGGCCA CATCACGGCG CTGTGCGGGA TAGCCCGCAT CGACGGCGCC GGCTGGCTGT TCGCCGGCGC GCCGAGCTCG TCGATCGTTC CGAACACGAT GACGCAGACG TCGCTGCAGC TCACCGCGAC CCGCTCGGTG TATACCTTCA CCGGCGGCGG GGTACGGCTG ACCGTCACGT TCTTCTCGCC GGTGGACCTG ACCAACCTGC AACGGCAGTG CGTGCCGTTC AGCTACGTCC AGATGCAGGC GGTCAGCGCC GACGGCGCGG CCCACAGCGT CCAGCTCCAT CTGGACATCT CCGCCGAGTG GGCGCACGGC GACGTGACGC AGCTGGTCAA CTGGTCGCAG CAGACCAGCC GGGCGAACAA CATCGCGCTC AGCTTCACCC CGACGAACCC CTCGACTCTG GCCGAGCACG GTGACCAGGC CTCCTGGGGC TCGGTCGTGC TGGCCACCGC CGGCGGCAGC GGGGTGACCT GGCAAATCGG GCAGGACACC GTGGTGCGCG GCGCCGCGGT GTCGTCCGGA TCGCTGAGCG GAACCTCGGA CTCGGCCCAG CCCCGCGCTA TCAACAACAA CTGGCCGGTT CTGGGGCTCA ACAAGGATCT GGGGTCGGTC GGGACAACGC CGTCGGCGTC GTTCGTGGTG GCGCTCGGCC ACGTCCGCAA TCCCGCGCTG AGCTACCTGG GATCCAACCT CGCACCGTGG TGGACGACGT ACTGGGGACC GTGGGCCGAC ATGGTCGACT GGTTCCTGGC CGACTACGGC TCGGCCCTGA GTTCGGCGAC AGCGCTGGAA TCCAAGCTCC AGAACGACTC CAGTACAGCC GTCGGCGGCG GCACGACCGG CGCCCACTAC GCGGCGCTGA CCGCACTGGC GCTGCGCCAG GCCGTCGGCG GAACGGAGCT GGTCAACCGG AACGGGACGC CCTGGGCTTT CCTGAAGGAG ATCTCCTCGG ACGGCAACGT GTCCACCATC GACGTCACCT ACCCGGCGTT CCCCGCCTAC CTGTACCTGT CGCCGTCCTA CCTGCAGATG CTCCTGGCGC CGATCCTGGA CTACTGCGAG CACGGCGGCT GGCCCAAGAC CTTCGCGGCG CACGACCTGG GTTCCAGCTA CCCGAACGCC TCCGGGCACA ACGACGGCAA CGAGGAGGAC ATGCCGGTCG AGGAATCGGC CAACATGCTG ATCATGACGG CCGCGCTGCT CCAGCATCTT CCCCAAGCCA CCGCCACGGC GACCGCTCAG CAGCATTACA CGATCCTGAA ACAGTGGGCT GACTACCTCG TCGCCAACGC CTTGGACCCG GCCAACCAGA ACCAGACCGA CGACTTCACC GGCTTCATCG CCCACAGCGC GAACCTGGCG CTCAAGGGCA TCATCGGCAT CGGAGCGATG GGCGTCGTCG CCGGCTTCGC AGGGAACACC ACAGATCACG CCCTCTACAC CTCCACATCG CGCAGCTACA TCAGCCAGTG GGTGAGCAAG GGCGAGGACC CGGCCGGCAC CAACCTCGAC CTGGCGTACG GGTCCTCCAC CACCTGGAGC CTGAAGTACA ACGGCTTCTC CGACCAGCTC CTGGGTCTGG ACCTGGTACC GGCAGGTATC GCCGCCCAGG AGGCCGGCTG GTACCAGTCG CACGCCGGGA CCTACGGCGT CCTGCTGGAT CCGCGCAACA ACTACACCAA GGCCGACTGG GAGATCTGGA CCGCGGCCTG GCTGCGCGAC CAAGGCGCGA TCCGCGACAC CCTCATCAAC GGGGTATACG GGTTCGCCAA CACCACACCC CAGCGGGCGC CCTTCTCGGA CTGGTACGTC GTGGCCACCG CCGCCCAGCA GGGCTTCCAG AACCGGCCGG TGGTCGGCGG CATGTTCACC CTCGTGGCAC CGCGCGCGGC GAGCACCACA TCCTGGGTGA GGATCCAGAA CCAGAACTCG GGGAAGCTCC TAGCGGTCTC CGGAATGTCG CTGGCCGACT CGGCCAACGT GACCCAGTGG ACCGACAACG GCACCGTCGA CCACGTATGG ACCGTCATCC CGAACCCCGA CGGCACCGTC CGCATCCAGA ACCGCAACAG CGGCAAGGTC TTGGCAGTCA ACGTGCAATC CCTCAGCGAC GGAGCCCCCA TCCAGCAGTA CCAGGACAAC GGCACACCAG ACCACCTCTG GCACATCATC GACGCCGGCA ACGGCTGGTC GAAGATCGTC AACGCCCACA GCGGAAAGGT GCTGTCAGTC TCGAACGCCT CGACAGCGGA CGGCGCGCAG GTAACCCAGT GGACTGACAA CGGCACGACA GATCACCTGT GGCGATTCAT CTGA
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Protein sequence | MTENVSDRAN AGDPGDASGA HTKPVDASRR EVFRWLGAAA AVVGAGGAFA TATPAQAAAS RRLATGSNAR LSTAAVNAPL PAASPAASTF APLRPPATPL AVRSPYLSTW QASDTLTGTW STFWNGHITA LCGIARIDGA GWLFAGAPSS SIVPNTMTQT SLQLTATRSV YTFTGGGVRL TVTFFSPVDL TNLQRQCVPF SYVQMQAVSA DGAAHSVQLH LDISAEWAHG DVTQLVNWSQ QTSRANNIAL SFTPTNPSTL AEHGDQASWG SVVLATAGGS GVTWQIGQDT VVRGAAVSSG SLSGTSDSAQ PRAINNNWPV LGLNKDLGSV GTTPSASFVV ALGHVRNPAL SYLGSNLAPW WTTYWGPWAD MVDWFLADYG SALSSATALE SKLQNDSSTA VGGGTTGAHY AALTALALRQ AVGGTELVNR NGTPWAFLKE ISSDGNVSTI DVTYPAFPAY LYLSPSYLQM LLAPILDYCE HGGWPKTFAA HDLGSSYPNA SGHNDGNEED MPVEESANML IMTAALLQHL PQATATATAQ QHYTILKQWA DYLVANALDP ANQNQTDDFT GFIAHSANLA LKGIIGIGAM GVVAGFAGNT TDHALYTSTS RSYISQWVSK GEDPAGTNLD LAYGSSTTWS LKYNGFSDQL LGLDLVPAGI AAQEAGWYQS HAGTYGVLLD PRNNYTKADW EIWTAAWLRD QGAIRDTLIN GVYGFANTTP QRAPFSDWYV VATAAQQGFQ NRPVVGGMFT LVAPRAASTT SWVRIQNQNS GKLLAVSGMS LADSANVTQW TDNGTVDHVW TVIPNPDGTV RIQNRNSGKV LAVNVQSLSD GAPIQQYQDN GTPDHLWHII DAGNGWSKIV NAHSGKVLSV SNASTADGAQ VTQWTDNGTT DHLWRFI
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