Gene Caci_6977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6977 
Symbol 
ID8338343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8071869 
End bp8074562 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content68% 
IMG OID644960057 
Producthypothetical protein 
Protein accessionYP_003117648 
Protein GI256396084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.449457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.690746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA ACGTTTCCGA CCGCGCCAAC GCCGGCGACC CCGGCGACGC GAGCGGTGCG 
CACACCAAGC CTGTCGACGC CTCGCGACGG GAGGTGTTCC GCTGGCTCGG TGCGGCAGCC
GCCGTCGTCG GCGCCGGCGG AGCCTTTGCG ACGGCCACTC CGGCACAAGC CGCTGCCTCA
CGAAGGCTGG CCACCGGCTC GAACGCACGC CTGTCGACCG CGGCGGTCAA CGCCCCGCTG
CCGGCGGCGA GTCCCGCGGC GTCGACCTTC GCGCCGCTGC GGCCGCCGGC GACGCCGCTG
GCCGTGCGGT CGCCGTATCT GAGCACCTGG CAGGCTTCTG ACACCCTGAC CGGGACCTGG
TCGACGTTCT GGAACGGCCA CATCACGGCG CTGTGCGGGA TAGCCCGCAT CGACGGCGCC
GGCTGGCTGT TCGCCGGCGC GCCGAGCTCG TCGATCGTTC CGAACACGAT GACGCAGACG
TCGCTGCAGC TCACCGCGAC CCGCTCGGTG TATACCTTCA CCGGCGGCGG GGTACGGCTG
ACCGTCACGT TCTTCTCGCC GGTGGACCTG ACCAACCTGC AACGGCAGTG CGTGCCGTTC
AGCTACGTCC AGATGCAGGC GGTCAGCGCC GACGGCGCGG CCCACAGCGT CCAGCTCCAT
CTGGACATCT CCGCCGAGTG GGCGCACGGC GACGTGACGC AGCTGGTCAA CTGGTCGCAG
CAGACCAGCC GGGCGAACAA CATCGCGCTC AGCTTCACCC CGACGAACCC CTCGACTCTG
GCCGAGCACG GTGACCAGGC CTCCTGGGGC TCGGTCGTGC TGGCCACCGC CGGCGGCAGC
GGGGTGACCT GGCAAATCGG GCAGGACACC GTGGTGCGCG GCGCCGCGGT GTCGTCCGGA
TCGCTGAGCG GAACCTCGGA CTCGGCCCAG CCCCGCGCTA TCAACAACAA CTGGCCGGTT
CTGGGGCTCA ACAAGGATCT GGGGTCGGTC GGGACAACGC CGTCGGCGTC GTTCGTGGTG
GCGCTCGGCC ACGTCCGCAA TCCCGCGCTG AGCTACCTGG GATCCAACCT CGCACCGTGG
TGGACGACGT ACTGGGGACC GTGGGCCGAC ATGGTCGACT GGTTCCTGGC CGACTACGGC
TCGGCCCTGA GTTCGGCGAC AGCGCTGGAA TCCAAGCTCC AGAACGACTC CAGTACAGCC
GTCGGCGGCG GCACGACCGG CGCCCACTAC GCGGCGCTGA CCGCACTGGC GCTGCGCCAG
GCCGTCGGCG GAACGGAGCT GGTCAACCGG AACGGGACGC CCTGGGCTTT CCTGAAGGAG
ATCTCCTCGG ACGGCAACGT GTCCACCATC GACGTCACCT ACCCGGCGTT CCCCGCCTAC
CTGTACCTGT CGCCGTCCTA CCTGCAGATG CTCCTGGCGC CGATCCTGGA CTACTGCGAG
CACGGCGGCT GGCCCAAGAC CTTCGCGGCG CACGACCTGG GTTCCAGCTA CCCGAACGCC
TCCGGGCACA ACGACGGCAA CGAGGAGGAC ATGCCGGTCG AGGAATCGGC CAACATGCTG
ATCATGACGG CCGCGCTGCT CCAGCATCTT CCCCAAGCCA CCGCCACGGC GACCGCTCAG
CAGCATTACA CGATCCTGAA ACAGTGGGCT GACTACCTCG TCGCCAACGC CTTGGACCCG
GCCAACCAGA ACCAGACCGA CGACTTCACC GGCTTCATCG CCCACAGCGC GAACCTGGCG
CTCAAGGGCA TCATCGGCAT CGGAGCGATG GGCGTCGTCG CCGGCTTCGC AGGGAACACC
ACAGATCACG CCCTCTACAC CTCCACATCG CGCAGCTACA TCAGCCAGTG GGTGAGCAAG
GGCGAGGACC CGGCCGGCAC CAACCTCGAC CTGGCGTACG GGTCCTCCAC CACCTGGAGC
CTGAAGTACA ACGGCTTCTC CGACCAGCTC CTGGGTCTGG ACCTGGTACC GGCAGGTATC
GCCGCCCAGG AGGCCGGCTG GTACCAGTCG CACGCCGGGA CCTACGGCGT CCTGCTGGAT
CCGCGCAACA ACTACACCAA GGCCGACTGG GAGATCTGGA CCGCGGCCTG GCTGCGCGAC
CAAGGCGCGA TCCGCGACAC CCTCATCAAC GGGGTATACG GGTTCGCCAA CACCACACCC
CAGCGGGCGC CCTTCTCGGA CTGGTACGTC GTGGCCACCG CCGCCCAGCA GGGCTTCCAG
AACCGGCCGG TGGTCGGCGG CATGTTCACC CTCGTGGCAC CGCGCGCGGC GAGCACCACA
TCCTGGGTGA GGATCCAGAA CCAGAACTCG GGGAAGCTCC TAGCGGTCTC CGGAATGTCG
CTGGCCGACT CGGCCAACGT GACCCAGTGG ACCGACAACG GCACCGTCGA CCACGTATGG
ACCGTCATCC CGAACCCCGA CGGCACCGTC CGCATCCAGA ACCGCAACAG CGGCAAGGTC
TTGGCAGTCA ACGTGCAATC CCTCAGCGAC GGAGCCCCCA TCCAGCAGTA CCAGGACAAC
GGCACACCAG ACCACCTCTG GCACATCATC GACGCCGGCA ACGGCTGGTC GAAGATCGTC
AACGCCCACA GCGGAAAGGT GCTGTCAGTC TCGAACGCCT CGACAGCGGA CGGCGCGCAG
GTAACCCAGT GGACTGACAA CGGCACGACA GATCACCTGT GGCGATTCAT CTGA
 
Protein sequence
MTENVSDRAN AGDPGDASGA HTKPVDASRR EVFRWLGAAA AVVGAGGAFA TATPAQAAAS 
RRLATGSNAR LSTAAVNAPL PAASPAASTF APLRPPATPL AVRSPYLSTW QASDTLTGTW
STFWNGHITA LCGIARIDGA GWLFAGAPSS SIVPNTMTQT SLQLTATRSV YTFTGGGVRL
TVTFFSPVDL TNLQRQCVPF SYVQMQAVSA DGAAHSVQLH LDISAEWAHG DVTQLVNWSQ
QTSRANNIAL SFTPTNPSTL AEHGDQASWG SVVLATAGGS GVTWQIGQDT VVRGAAVSSG
SLSGTSDSAQ PRAINNNWPV LGLNKDLGSV GTTPSASFVV ALGHVRNPAL SYLGSNLAPW
WTTYWGPWAD MVDWFLADYG SALSSATALE SKLQNDSSTA VGGGTTGAHY AALTALALRQ
AVGGTELVNR NGTPWAFLKE ISSDGNVSTI DVTYPAFPAY LYLSPSYLQM LLAPILDYCE
HGGWPKTFAA HDLGSSYPNA SGHNDGNEED MPVEESANML IMTAALLQHL PQATATATAQ
QHYTILKQWA DYLVANALDP ANQNQTDDFT GFIAHSANLA LKGIIGIGAM GVVAGFAGNT
TDHALYTSTS RSYISQWVSK GEDPAGTNLD LAYGSSTTWS LKYNGFSDQL LGLDLVPAGI
AAQEAGWYQS HAGTYGVLLD PRNNYTKADW EIWTAAWLRD QGAIRDTLIN GVYGFANTTP
QRAPFSDWYV VATAAQQGFQ NRPVVGGMFT LVAPRAASTT SWVRIQNQNS GKLLAVSGMS
LADSANVTQW TDNGTVDHVW TVIPNPDGTV RIQNRNSGKV LAVNVQSLSD GAPIQQYQDN
GTPDHLWHII DAGNGWSKIV NAHSGKVLSV SNASTADGAQ VTQWTDNGTT DHLWRFI