| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6964 |
|---|
| Symbol | |
|---|
| ID | 8338330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8051812 |
|---|
| End bp | 8053011 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960044 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003117635 |
|---|
| Protein GI | 256396071 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.198128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGC TTCTCCAGCG CCTGTCGACA TCGAAGCGCG TGACCTGGCT GATGTCGCAG
GCAGTGGCGC TGTCCGCCGC CTGCCTCTAC GCGCTGATGC TCCCCTTGAC GATGCCGTCC
CCCAAGTACG GCCTGCTCCG ATTCCCCGAC CTCGAGCCGG TCCAGATGAT GGCTCTGTGC
GTCGTACTCG CCCTCCCGGT CCTGCTGGTG CGCCGTCTGC CGGCGACTGT CTTCGCGGTG
ATCCTGGGCG AATCGATCCT CGGCGACGCG TTCGGCGCGC GGCCCTTGAT CATGTTCGTC
CTGCTCGTCG GCGTGGGCGG GTACCTCGCC GCCCAGCGGC CGAAGGCTGC CGCCGTCGGC
TCCGTCGCGG GCGTCGCGGC GGCGTTCGTC AACGACATCC ACATCCGCGG GCAGAACATC
GGCGACCAGG CCCAGTGGAC CGGGTGGCTC GCGATGTGGT TCGCCCTCGC GTGGGTCTTC
GGCGGGGTGT ACCGCAAACG CCGCGAATAT CTCGAAGCCC TGCACGAGCA GACCGCGGCG
CGCGTCGTCA TGTCCGAGCG GCTCAGGATC GCCCGCGAAC TGCACGACAG CGTCGCGCAC
AGTATCGGCA TCATCACGGT GCTGTCGGGA GCGGCGGCAC GGGTCGTGGA CACCAAGCCC
GAGCAGACGC GGCAGGCCCT GACCGGCATC GAGACCACCA GCCGGGAGAC GCTGCTGGAG
TTGCAGCGCA TGCTCGGGGC ACTCCGCCGC GCCGAGCCGG ACGACGCCAT GCCGCAGGCC
GCTCCGCTGG CGCCGGCCGG CAGCCTGGCC GACGTCCCGC AGCTCGCCGA ACGCACAGCC
GGCGCCGGGG TGCGAGTCCA TGTGACCTGG CAAGGCGAGC AACGTCCACT GCCACCGGAG
ATCGAGCTGT CGGCCTTCCG CATCATCCAG GAGTCGGTGA CGAACGTGGT GCGGCATTCC
GGCGCGCGAA CCTGCCAAGT CGCGGTCGGC TACGAGCCGA CAGGCGTGCG GATCGAGGTC
GTGGACGACG GAGACGACGG TCTGTCCGGA CCGGCCCGCC CGAAGTTCGC CCTGGGCGCC
GGCGGCAACG GCTTCGGCCT CCTCGGCATG CGCGAACGGG TGACCCTGCT CTCCGGCCAG
TTCAGCGCCG ACCGCCGCCC CGAGGGCGGA TTCCGAGTGA CAGCCAGGCT CCCAGCATGA
|
|---|
| Protein sequence | MEELLQRLST SKRVTWLMSQ AVALSAACLY ALMLPLTMPS PKYGLLRFPD LEPVQMMALC
VVLALPVLLV RRLPATVFAV ILGESILGDA FGARPLIMFV LLVGVGGYLA AQRPKAAAVG
SVAGVAAAFV NDIHIRGQNI GDQAQWTGWL AMWFALAWVF GGVYRKRREY LEALHEQTAA
RVVMSERLRI ARELHDSVAH SIGIITVLSG AAARVVDTKP EQTRQALTGI ETTSRETLLE
LQRMLGALRR AEPDDAMPQA APLAPAGSLA DVPQLAERTA GAGVRVHVTW QGEQRPLPPE
IELSAFRIIQ ESVTNVVRHS GARTCQVAVG YEPTGVRIEV VDDGDDGLSG PARPKFALGA
GGNGFGLLGM RERVTLLSGQ FSADRRPEGG FRVTARLPA
|
|---|
| |