Gene Caci_6919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6919 
Symbol 
ID8338285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7993858 
End bp7994583 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID644960003 
Productglycosyl transferase family 2 
Protein accessionYP_003117594 
Protein GI256396030 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000675814 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000119796 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGTTC CGATCCTGAG CTGCGGACTT GAACCCGCGG CCCCGGAGGA CTCGCAATCG 
GCAGACAGGA AGCTGAGACA CCCCCGAACA TCTGCCATCG TCGCGGCGTT CAACGAAGCC
GCCACCATCC ACAGCGTCGT CATCGCGCTG CTCGGCTGCC GGATGATCGA CGAGGTGATC
GTCGTCGACG ACGGCTCGAC CGACGGGACA TCCGAACGGC TGCCTCCGGC CGTCCGGTGC
ATCCGCAACA GCGTCCGGGG CGGCAAGGGC GAGGCAATGG AACTCGCTGT CAGGAGCGCA
CGGGGCGACA TCCTCTGCTT CGCGGACGCC GACCTCGTCG GACTCACCCC GCAGGCCGTG
ACGTCGCTGG TAGCGCCAGT ACTAGCCGGC GACGCCGACA TGATGGTCGG GCTGCGCTGG
CTACCTCGAT ACCGCATCAG GCCCCTGCGA GCGGTGGTCG CCAAGCTCAG CGGGGAGCGC
GTGCTCACCC GATCACTGTG GAACAGCGTC CCGGACCGGT TCCGCAGCGG ATTCCAGATC
GAGGCGGCTC TCAACATGAC CGCGCGCAGG GCTGGCCTGA AGGTGGGGAA CCAGCTGCTT
CCCGGAGTGA AGCAGATCGT CAAGGAACGC AAGCGCGGCC TGCTGCCAGG GCTCGGGGCG
CGCTTCTGGA TGTCTATGGA AGTCGCGCTG ACCTACGTCC GCCTCATCGT CACGGGACGG
GCCTAG
 
Protein sequence
MNVPILSCGL EPAAPEDSQS ADRKLRHPRT SAIVAAFNEA ATIHSVVIAL LGCRMIDEVI 
VVDDGSTDGT SERLPPAVRC IRNSVRGGKG EAMELAVRSA RGDILCFADA DLVGLTPQAV
TSLVAPVLAG DADMMVGLRW LPRYRIRPLR AVVAKLSGER VLTRSLWNSV PDRFRSGFQI
EAALNMTARR AGLKVGNQLL PGVKQIVKER KRGLLPGLGA RFWMSMEVAL TYVRLIVTGR
A