Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6919 |
Symbol | |
ID | 8338285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7993858 |
End bp | 7994583 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644960003 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003117594 |
Protein GI | 256396030 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000675814 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000119796 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATGTTC CGATCCTGAG CTGCGGACTT GAACCCGCGG CCCCGGAGGA CTCGCAATCG GCAGACAGGA AGCTGAGACA CCCCCGAACA TCTGCCATCG TCGCGGCGTT CAACGAAGCC GCCACCATCC ACAGCGTCGT CATCGCGCTG CTCGGCTGCC GGATGATCGA CGAGGTGATC GTCGTCGACG ACGGCTCGAC CGACGGGACA TCCGAACGGC TGCCTCCGGC CGTCCGGTGC ATCCGCAACA GCGTCCGGGG CGGCAAGGGC GAGGCAATGG AACTCGCTGT CAGGAGCGCA CGGGGCGACA TCCTCTGCTT CGCGGACGCC GACCTCGTCG GACTCACCCC GCAGGCCGTG ACGTCGCTGG TAGCGCCAGT ACTAGCCGGC GACGCCGACA TGATGGTCGG GCTGCGCTGG CTACCTCGAT ACCGCATCAG GCCCCTGCGA GCGGTGGTCG CCAAGCTCAG CGGGGAGCGC GTGCTCACCC GATCACTGTG GAACAGCGTC CCGGACCGGT TCCGCAGCGG ATTCCAGATC GAGGCGGCTC TCAACATGAC CGCGCGCAGG GCTGGCCTGA AGGTGGGGAA CCAGCTGCTT CCCGGAGTGA AGCAGATCGT CAAGGAACGC AAGCGCGGCC TGCTGCCAGG GCTCGGGGCG CGCTTCTGGA TGTCTATGGA AGTCGCGCTG ACCTACGTCC GCCTCATCGT CACGGGACGG GCCTAG
|
Protein sequence | MNVPILSCGL EPAAPEDSQS ADRKLRHPRT SAIVAAFNEA ATIHSVVIAL LGCRMIDEVI VVDDGSTDGT SERLPPAVRC IRNSVRGGKG EAMELAVRSA RGDILCFADA DLVGLTPQAV TSLVAPVLAG DADMMVGLRW LPRYRIRPLR AVVAKLSGER VLTRSLWNSV PDRFRSGFQI EAALNMTARR AGLKVGNQLL PGVKQIVKER KRGLLPGLGA RFWMSMEVAL TYVRLIVTGR A
|
| |