| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6849 |
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| Symbol | |
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| ID | 8338215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7910120 |
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| End bp | 7911946 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644959940 |
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| Product | type IV secretory pathway VirB4 protein-like protein |
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| Protein accession | YP_003117531 |
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| Protein GI | 256395967 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0610151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.925039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCTC TGACATCTGT TGCAGCCGGC GCCGCGTCGA TCCTGCCACT GACGTCGAGC
ACCAAGGCAT CCCGGCGCAG TGCCCTCGGC TTGGGGCCGT CCAGCCTCAC CATCGGCTCC
AAGACTCTCG CCATCGGCGA GTCGACCCAT GCCGCGAGCT TCGCAGTCGC CGACTACCCG
GCAGAGGTCG GCAACGGCTG GTTGGAGCCC CTTCTCTCCT ACCCCGCACG CATCGACGTC
GCGATCCATA TCGAGCCGGT ACCGGCGATC GTCGCGGCCG AAAGGCTGCG CAAGCAGCGG
GCACGTCTGG AATCCGGTCG CCGTCTCAGC GCGGAACGAG GACGGCTCGA CGATCCGCTC
ACCGAGTCCA CTGCTGCCGA CGCCCGCGAG CTCGCGTATC GGCTCGCCTG TGGCGAAGGC
AGGCTGTTCA CCGTTGGCAT CTACCTGACC GTCTTCGCCG ACAGCGAGGA TGCCCTGACC
GAAACCGTCG CGGCGGTGAA GGCGACGGCC GACGGAATGC TGCTGAGGCT GGTGCCCGCC
ACCTATCGCA CCGTCCAAGG TTGGACTACG ACGCTGCCGC TGGGCCTGGA CCGACTGCGG
ATCCGACGGA CGTTCGACAC CGACGCCCTT GCAGCCTGTT TCCCGTTCAC CAGCGATCAG
CTCGCCCAAG TAGCCGACTC GACCACGCCG GTTCTGATCG GCGTCAACGG CACCGGCGCC
GGCCTGGTGT GCTTCGACCG CTGGGCGCTG GACAACCACA ACTCGGTCGT GCTGGCACGC
TCCGGCGCCG GGAAGTCGTA CCTGACCAAG CTCGACATCC TCCGCTCCCT CTACTCCGGG
GTCCAGGTGA TGGTCGTCGA CCCCGAACAG GAGTACGTAC GCCTGGCCGA GGCGGTCGGA
GGCACGGTCA TCGAACTTGG CGTGCCCGGT ACCAGAATCA ACCCCTTCGA CCTGCCGTTT
TCAGATAGAG AGTCGTCCAC CGACGCAGTG CGGCGAAGGG CACTGTTCGG CCACACCGTC
GTGTCCGTGC TGCTGGGCAG CGACCTCACA GCCGGCGAAC GTGCCGCCCT CGACGCCGCG
ATCCTGTCGG CCTACGACAG GGCCGGGATC ACTGACGACG TACGAACGCA CAGTCGCGCG
GCTCCGACTC TGACCGATGT CGTGGACGTC CTGGCCACCG GCAGCGGAGC CGAGTCCAAG
TCGCTCGCCG AACGCCTTGC TCCGCACACC ACGGGGTCGT TCGCAGGGCT CTTCAACGGT
CCGACCAGCA CCGCCGCTGA AGGCCACCTG GTGGTCTTCG CCCTGAAGAA CCTGCCGGAA
GAGCTGAAGG CGATCGGCAC GCTACTGGTT CTCGACGCGA TCTGGCGCCA GGTCACATCG
CCCCAGCGTC GAAGAAGGCT CGTCGTCGTG GACGAGGCAT GGCTGCTGAT GAGGGAACCC
GCCGGCGCCC GGTTCCTGTT CCGAATGGCG AAGGCCGCAC GCAAGCACTG GGCCGGCCTG
GCCGTCATCA CGCAGGACGC GGCTGACCTG CTGGGATCGG ACCTCGGCCA AGCCGTAGTG
GCGAACGCCG CCACTCAGAT CCTGCTGCGG CAGGCCCCAC AGTCCATCGA GGCCGTCGCC
GCGGCGTTCC GACTCTCCGG CGGCGAACGT GCGTATCTGT TGGCCGCCGG CCGCGGATCG
GGGCTCATCG CCATCGGCAC GAGCCGAGCC GCGTTCTCCG CGGTCGCCTC GTCTGAGGAG
CACATACTCG CCACCACCGA TCCCGCTGAG CTGGCGCTGA TCGATGCCTC CCGGCACGAT
CCAGACCCCG AGGACGAGGA CATCTGA
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| Protein sequence | MRSLTSVAAG AASILPLTSS TKASRRSALG LGPSSLTIGS KTLAIGESTH AASFAVADYP
AEVGNGWLEP LLSYPARIDV AIHIEPVPAI VAAERLRKQR ARLESGRRLS AERGRLDDPL
TESTAADARE LAYRLACGEG RLFTVGIYLT VFADSEDALT ETVAAVKATA DGMLLRLVPA
TYRTVQGWTT TLPLGLDRLR IRRTFDTDAL AACFPFTSDQ LAQVADSTTP VLIGVNGTGA
GLVCFDRWAL DNHNSVVLAR SGAGKSYLTK LDILRSLYSG VQVMVVDPEQ EYVRLAEAVG
GTVIELGVPG TRINPFDLPF SDRESSTDAV RRRALFGHTV VSVLLGSDLT AGERAALDAA
ILSAYDRAGI TDDVRTHSRA APTLTDVVDV LATGSGAESK SLAERLAPHT TGSFAGLFNG
PTSTAAEGHL VVFALKNLPE ELKAIGTLLV LDAIWRQVTS PQRRRRLVVV DEAWLLMREP
AGARFLFRMA KAARKHWAGL AVITQDAADL LGSDLGQAVV ANAATQILLR QAPQSIEAVA
AAFRLSGGER AYLLAAGRGS GLIAIGTSRA AFSAVASSEE HILATTDPAE LALIDASRHD
PDPEDEDI
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