| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6841 |
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| Symbol | |
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| ID | 8338207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7897171 |
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| End bp | 7898649 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644959932 |
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| Product | integrase family protein |
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| Protein accession | YP_003117523 |
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| Protein GI | 256395959 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAGCC TGGACGTACG AGTCTGGAGC ATTACACCGA TCAAACTGGC GAATAGGACG
ACCTACAAAG TTCGTTGGGG CGTGGCGGGA CGAACCTTCA GCAAGACCTA CGCCAGCAAG
CAACTGGCTG AATCCCGGCG AAGCGAACTA CTGACGGCTC AGCGCCGCGG CGAGGCATTC
GACCGCGATC GCGGGCTGCC GGAGTCAGAG ATCCGTGCGA TGCTCGCCAG CGTCAGCTGG
TACCAGAACG CGATCGAGTT CATGGACACG GTGTGGCCCG GCCTTGAACC GGGTTCTCGC
CGGAAGTTGG CGGAGTCGCT CGCAACCGTC ACGCTGGCCC TCACCGAGCC TGGGATCGAC
CCAGTCGATC ACGCGTTCTG CTTCCGTTGG CTGGTCCGAT GGGCCTTCAA CAGCCGGGAG
CGAATGACCG CGGCATTGGA CGGCGAGGCA GCGTTCGTCG TCCAGTGGAT CGCAGATCAT
TCCCTCCCGA TGTCGGCGCT CGCCGATCCG AAGGTGGCCA GGCGCGCCTT CAACAGTACG
ACGACGGACT GTTTTGGCAG GCCTTATGCG GTCAACACCT ACCGCAACAA GAAGAAGGGG
CTCAACGGCG CGATCAGTTT CGCGATCGAG ATGGGTCGCC TCGACGCGAA CCCTCTCGAA
CGCATCAGCA CGACCCCGCC CAAACATAAG AGCTCCGTCG ATCGCACCGC TGTGGTCAAC
CCGGCTCAAG CGCGGTTGCT CATCGAAAGA GTTCGCGAAC AGGGCCCGAC GGCGCCACGG
TTGGTGGCGT TCTTTGCTGT TTTGTACTTC GCCGGCCTTC GGCCTAGCGA GGCGCTCGCT
CTGCGCGTCT CGGACTGCGA CCTGCCTGAC GTCGGCTGGG GTTCTCTGCG GTTTGCTGAG
TCCGTGCCGT ATGCCAATGC GGCGTGGACT GACGACGGTG AGACGAGTCC GCGCAAGTCG
CTCAAGCATC GCGCTCAAGG GCAGAGCCGC ATGGTCCCAG CCTGCCCGGA GCTGGTGCGG
TACCTCGCGG CGCATATCGA GAAGTTCGGC GCCGCCCCCG ATGGTCGCCT GTTCTTCCGT
CTGGACGGCG GCCCAATTCG TCACTCCACC TATGCCAAGA TCTGGGCCAG AGCCCGGGCG
GCGGCACTCA CGCCGGATCA GTGCCGCTCG CAGCTGGGCC GACGGCCCTA TGACCTGCGG
CACGCGGCGG TCTCGACCTG GCTGAACGCC GGGGTTCCGG CCACACAGGT CGCTGAGTGG
GCCGGCCACA GTGTCGAGAT ACTGCTCAGC ACCTACGCCA AGTGCATCGA TGGGCCGGAC
CAGGATGAGC TGGCCCGGCG GCGCATCGAT GCGGCGCTAG GTTCGGCAGA TGGGGCCGTT
GACCAGGGGG CAGCTCGCGA AAGCCAGGAC AGAAATAGGA CACAAACAGC GGCTGATGAT
GATCCACAGC GGGAAACAGT GAGACATCGG CTGCCCTGA
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| Protein sequence | MQSLDVRVWS ITPIKLANRT TYKVRWGVAG RTFSKTYASK QLAESRRSEL LTAQRRGEAF
DRDRGLPESE IRAMLASVSW YQNAIEFMDT VWPGLEPGSR RKLAESLATV TLALTEPGID
PVDHAFCFRW LVRWAFNSRE RMTAALDGEA AFVVQWIADH SLPMSALADP KVARRAFNST
TTDCFGRPYA VNTYRNKKKG LNGAISFAIE MGRLDANPLE RISTTPPKHK SSVDRTAVVN
PAQARLLIER VREQGPTAPR LVAFFAVLYF AGLRPSEALA LRVSDCDLPD VGWGSLRFAE
SVPYANAAWT DDGETSPRKS LKHRAQGQSR MVPACPELVR YLAAHIEKFG AAPDGRLFFR
LDGGPIRHST YAKIWARARA AALTPDQCRS QLGRRPYDLR HAAVSTWLNA GVPATQVAEW
AGHSVEILLS TYAKCIDGPD QDELARRRID AALGSADGAV DQGAARESQD RNRTQTAADD
DPQRETVRHR LP
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