Gene Caci_6756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6756 
Symbol 
ID8338120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7795144 
End bp7796550 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content72% 
IMG OID644959849 
Producthypothetical protein 
Protein accessionYP_003117442 
Protein GI256395878 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.557555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA GCCCTGACAC ACAGACTCCT GAGATTCAGA CCCCCGGCAT TCGCATTCCT 
CACACCAGGG CTTCCGCCGC CACACCCCGC CCCGCCGAAG CCGACCTGGA AAAGCTCGCC
GCCGACACCG TCGCCGCCTG CTCCCGCCTG ATCCGCTTCG ACACCAGCAA CTTCGGCGCC
GGCGAGAGCC GCGGCGAGCG CGCCTGCGCC GAATGGGTCG CCGAGCAGAT CACCGACGCC
GGCTTCGATC CGATCGTCCT GGAATCGGCG CCCCGCCGCG CGAACACCGT GGTCCGCATC
CCCGGCACCG ACCCCGGCGC GCCCGCGCTG CTGGTCCACG GCCACCTCGA CGTCGTCCCG
GCCGAGCCCG CCGACTGGCG GTCCTACCCC TTCTCCGGCG ACGTCCGCGA CGGCGCGGTC
TGGGGACGCG GCGCGCTGGA CATGAAGGAC ATGGACGCGA TGATGCTCGC GTTCGTCCAG
CACCTGGCCC GCACCGGGCA GCGGCCGCCG CGCGACATCG TCATGGCGTT CGTCGCCGAC
GAGGAGGACA CCGGCGACTT CGGCGCCGGC TTCCTGTGCC GCGAGCACCC CGACCTGTTC
GAGGGCGTGG CGAGCGCGAT CAGCGAGTCC GGCGGGCACT CGGTGCACCT GTCCGACGGC
GCGCGCCTGT ACCCGATCGC GGCGGGGGAG CGCGGCAGCG CGTGGATGAC CGTGACGATG
CGCGGCACCG CCGGGCACGG CTCCCGCCGC AACGACGACA ACGCGATCGC CAAGCTCGCC
GCGCTGATCA CGCGCTTCGC AGAGTACGAA TGGCCGGTCC GGGTCGTCCC GATCGTCAGA
GCCCTGTTGG ACGGCCTGTC CGAGCACTTC GGCCGCGAGA TCTCCCCGCA AGACCTGTCC
GGACTCGGAG CCGCCGCCCC GCTGCTCGCC GACACCCTGC GCAACTCGGT CAACCCGACA
ATGCTGCGTG CCGGCTACAA GCACAACGTC ATTCCCTCCG AGGCCAGCGT CGCCCTGGAC
GGCCGCCTGC TGCCGGGCAC CGAGGCCGAG TTCTTCGCCA CCGTCGACGC TCTCCTCGGC
CCGGACGCCA CCCGCGTCGG CGACCACAGC GCGCCGGTCA GCGCCGACTT CACCGCCCCG
GACTTCGCCG CGATCGCCGC CGCCCTGCGC GCCTTCGACC CCGAGGCGCT CGTCCTGCCG
TTCTGCATGA CCGGCGGCAC CGACGCCAAG GCCTTCGCCA AGATCGGCAT CCCCGGCTTC
GGCTTCGTCC CAGGACGCAC TCCCAAGGAT TTCAACGCCT GGCAGTACGT CCACGGCGTC
GACGAGCACG TCCTCACCGA CAGTCTGGCC TTCGGCTCCG GTGTCCTGGC CACCTACCTG
ATGACCGACC CCGGGACGCG CGCATGA
 
Protein sequence
MTESPDTQTP EIQTPGIRIP HTRASAATPR PAEADLEKLA ADTVAACSRL IRFDTSNFGA 
GESRGERACA EWVAEQITDA GFDPIVLESA PRRANTVVRI PGTDPGAPAL LVHGHLDVVP
AEPADWRSYP FSGDVRDGAV WGRGALDMKD MDAMMLAFVQ HLARTGQRPP RDIVMAFVAD
EEDTGDFGAG FLCREHPDLF EGVASAISES GGHSVHLSDG ARLYPIAAGE RGSAWMTVTM
RGTAGHGSRR NDDNAIAKLA ALITRFAEYE WPVRVVPIVR ALLDGLSEHF GREISPQDLS
GLGAAAPLLA DTLRNSVNPT MLRAGYKHNV IPSEASVALD GRLLPGTEAE FFATVDALLG
PDATRVGDHS APVSADFTAP DFAAIAAALR AFDPEALVLP FCMTGGTDAK AFAKIGIPGF
GFVPGRTPKD FNAWQYVHGV DEHVLTDSLA FGSGVLATYL MTDPGTRA