| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6754 |
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| Symbol | |
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| ID | 8338118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7792938 |
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| End bp | 7794209 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959847 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003117440 |
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| Protein GI | 256395876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00057855 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA TCTCTGTGCG GGATCAAATC TGGCCGGCGC ACGCGGCGTG GGCCGACGGC
GAGCTCACGG TCGCCGGACA CGGCGTGCGC GCGCTCGCCG CCGAGTTCGG CACGCCGCTC
TACGTGCTCG ACGCCGCCGA CTTCCGAGCG CGCTGCTCGG CGTGGCTGGA CGCATTCCCG
AACGGAGACG TGCACTACGG CGGCAAGGCG TTCCTGGCGC CGGCGGTGGT GGGGTGGTTG
GCGGAGCTGG GACTGTGCCT GGATGTGTGC AGCGGCGGGG AATTGGCGGT GGCGCGCGTC
GGCGGGATGC CGCCGGAGCG CGTGGTGTTC CACGGCAACA ACAAGTCGGT GGCGGAGATC
CGGCAGGCGG TGGCGTGGGG CGTCGGCTGC ATCGTGCTGG ACTCGCTGCA CGAGGTCGAG
CGCGTGGCGC GGGCAGCCGC AGAGGCGGGC ACGCGACAGC CGGTCATGGT GCGGGTGAAG
CCCGGAATCG ATGCCGCCAC CCACGCTTCG TTGGCGACCG GTGGCGAGCG CACCAAGTTC
GGGATGTCGA TGGCCTCCGG CGAGGCGATG GAGGCGGTGC GCCGGGTACT GGGGGAATCA
GCACTCGAAT TCATCGGGCT GCACTCGCAC ATCGGCTCGC AGATCTTCGA CCTGGACTCG
TTCGCCGAAG CCGCGCGCCG CATGGTCGGC TTCCTGCGCG ACGTCGAGCG CCGGCAGGGG
ATCGTCGTCG GCCGCCTGGA TCTCGGCGGC GGCCTCGGTA TCCCTTATCT GCCCGGGGAA
AAGCCCGCCT CGACTCCGGC GGATCTCGCC GACGTCCTGC ACGCGGTGGT CCCTGCCGGC
ATCCGTCTCG CCGTCGAACC CGGTCGCGCC ATCGCCGGCC CGAGCACCGT CGCGGTCTAC
GAGGTCGGCA CAGTGAAGGG CGGCTTCGTC GCGGTGGACG GCGGCATGAG CGACAACCCG
CGCCCGGCGA CCTACGGCGC CGTGTACACC GCGGTCCTCG CCTCGCGGCA CAGCGCGGCG
CCGGTCGAGC CGGTGACGGT CGTGGGCAAG CACTGCGAGA GCGGCGACGT GCTCATCGAG
GACATCGCGC TGCCGGCGGA CCTGGCGCCC GGCGATCTGA TCGCGATCCC GTGCTCCGGC
GCCTATCAGC GTTCCACTGC CAGCAACTAC AACCTGGTGA CGCGGCCGCC GGTGGTCGCG
GTGCACGAGA ACGCGGCGCA CGCCATTGTG CGCCGCGAGA CTGAGGAGGA TCTGCTGCGG
CTCTATCCCT GA
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| Protein sequence | MNSISVRDQI WPAHAAWADG ELTVAGHGVR ALAAEFGTPL YVLDAADFRA RCSAWLDAFP
NGDVHYGGKA FLAPAVVGWL AELGLCLDVC SGGELAVARV GGMPPERVVF HGNNKSVAEI
RQAVAWGVGC IVLDSLHEVE RVARAAAEAG TRQPVMVRVK PGIDAATHAS LATGGERTKF
GMSMASGEAM EAVRRVLGES ALEFIGLHSH IGSQIFDLDS FAEAARRMVG FLRDVERRQG
IVVGRLDLGG GLGIPYLPGE KPASTPADLA DVLHAVVPAG IRLAVEPGRA IAGPSTVAVY
EVGTVKGGFV AVDGGMSDNP RPATYGAVYT AVLASRHSAA PVEPVTVVGK HCESGDVLIE
DIALPADLAP GDLIAIPCSG AYQRSTASNY NLVTRPPVVA VHENAAHAIV RRETEEDLLR
LYP
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