Gene Caci_6692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6692 
Symbol 
ID8338056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7710263 
End bp7711204 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID644959786 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003117379 
Protein GI256395815 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.178977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG TCGCCATCAT CGCCCTGGAC GGCGTGATCC CCTTCGACCT CGCGACGCCG 
ATCGAGGTGT TCACCCGCTC CCGTCTGCCC GACGGACGCT CCGGCTACCA AGTGCGCGTG
TGCGCCGAGC ATCCCGAGCT CGACGCGGGA GCCTTCACTC TGCGCGCGCC ATGGGGACTG
GAAGCGCTCC AGGACGCCGA CACGATCATC GTCCCCGGCG TCGCTGAACC CCTCGCGCCG
CTGCCGACGA CCGTCCGCGA AGCCCTGCGC GCCGCCGCGG CGAACGGCAC CCGCATCGCC
TCGATCTGCA CCGGCACCTT CCCTCTCGCC GCGACCGGCC TGCTCGACGG CCTGCGCGCC
ACCACCCACT GGATCGCCGC CGAGCGTCTC GCCGCCGCGT ACCCGGCGAT CGACGTGGAC
GCCAGCGTCC TGTACGTCGA CAACGGCCAG ATCCTCACCT CCGCCGGCGC CGCCGCCGGT
CTGGACCTGT GCCTGCACCT GATCCGCAAG GACTACGGCT CCGCCGTCGC CGCGCACGCC
GCCCGCCTGT CGGTGATGCC GCTGGAGCGC GAGGGCGGCC AAGCCCAGTT CATCGTGCAC
GACCACACTC CCGTCGCACC GCGGGGCGCC ACGCTGGAAC CGCTGCTCGC CTGGCTCCGG
GACAACCTCA ACCGCGACCT GACCCTCCCC GACATCGCTG CCGAAGCCGG ACTGAGCACC
CGCACGCTGA TCCGCCGCTT CCGCGAGCAG ACCGGCACGA CCCCGCTTCA GTGGCTGCAC
CGGGCCCGCG TCCGGCGCGC GCAACATCTG CTGGAGACCA CGCAGCACCC GGTCGAGCGG
ATCGCGACGC AGGTGGGGTT CGGGTCGGCG ACAGCCTTCC GCGACCGGTT CAAGAAGACC
ACCGGGACCA GCCCGAACGC CTACCGCCGG ACGTTCAGCT GA
 
Protein sequence
MHTVAIIALD GVIPFDLATP IEVFTRSRLP DGRSGYQVRV CAEHPELDAG AFTLRAPWGL 
EALQDADTII VPGVAEPLAP LPTTVREALR AAAANGTRIA SICTGTFPLA ATGLLDGLRA
TTHWIAAERL AAAYPAIDVD ASVLYVDNGQ ILTSAGAAAG LDLCLHLIRK DYGSAVAAHA
ARLSVMPLER EGGQAQFIVH DHTPVAPRGA TLEPLLAWLR DNLNRDLTLP DIAAEAGLST
RTLIRRFREQ TGTTPLQWLH RARVRRAQHL LETTQHPVER IATQVGFGSA TAFRDRFKKT
TGTSPNAYRR TFS