Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6692 |
Symbol | |
ID | 8338056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7710263 |
End bp | 7711204 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644959786 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003117379 |
Protein GI | 256395815 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.178977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCG TCGCCATCAT CGCCCTGGAC GGCGTGATCC CCTTCGACCT CGCGACGCCG ATCGAGGTGT TCACCCGCTC CCGTCTGCCC GACGGACGCT CCGGCTACCA AGTGCGCGTG TGCGCCGAGC ATCCCGAGCT CGACGCGGGA GCCTTCACTC TGCGCGCGCC ATGGGGACTG GAAGCGCTCC AGGACGCCGA CACGATCATC GTCCCCGGCG TCGCTGAACC CCTCGCGCCG CTGCCGACGA CCGTCCGCGA AGCCCTGCGC GCCGCCGCGG CGAACGGCAC CCGCATCGCC TCGATCTGCA CCGGCACCTT CCCTCTCGCC GCGACCGGCC TGCTCGACGG CCTGCGCGCC ACCACCCACT GGATCGCCGC CGAGCGTCTC GCCGCCGCGT ACCCGGCGAT CGACGTGGAC GCCAGCGTCC TGTACGTCGA CAACGGCCAG ATCCTCACCT CCGCCGGCGC CGCCGCCGGT CTGGACCTGT GCCTGCACCT GATCCGCAAG GACTACGGCT CCGCCGTCGC CGCGCACGCC GCCCGCCTGT CGGTGATGCC GCTGGAGCGC GAGGGCGGCC AAGCCCAGTT CATCGTGCAC GACCACACTC CCGTCGCACC GCGGGGCGCC ACGCTGGAAC CGCTGCTCGC CTGGCTCCGG GACAACCTCA ACCGCGACCT GACCCTCCCC GACATCGCTG CCGAAGCCGG ACTGAGCACC CGCACGCTGA TCCGCCGCTT CCGCGAGCAG ACCGGCACGA CCCCGCTTCA GTGGCTGCAC CGGGCCCGCG TCCGGCGCGC GCAACATCTG CTGGAGACCA CGCAGCACCC GGTCGAGCGG ATCGCGACGC AGGTGGGGTT CGGGTCGGCG ACAGCCTTCC GCGACCGGTT CAAGAAGACC ACCGGGACCA GCCCGAACGC CTACCGCCGG ACGTTCAGCT GA
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Protein sequence | MHTVAIIALD GVIPFDLATP IEVFTRSRLP DGRSGYQVRV CAEHPELDAG AFTLRAPWGL EALQDADTII VPGVAEPLAP LPTTVREALR AAAANGTRIA SICTGTFPLA ATGLLDGLRA TTHWIAAERL AAAYPAIDVD ASVLYVDNGQ ILTSAGAAAG LDLCLHLIRK DYGSAVAAHA ARLSVMPLER EGGQAQFIVH DHTPVAPRGA TLEPLLAWLR DNLNRDLTLP DIAAEAGLST RTLIRRFREQ TGTTPLQWLH RARVRRAQHL LETTQHPVER IATQVGFGSA TAFRDRFKKT TGTSPNAYRR TFS
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