| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6687 |
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| Symbol | |
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| ID | 8338051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7706312 |
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| End bp | 7707481 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959781 |
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| Product | xylose isomerase |
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| Protein accession | YP_003117374 |
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| Protein GI | 256395810 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.39813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCG CACCGTCCCC CGCTGACAAA TTCACCTTCG GCCTGTGGAC CGTGGGCTGG
CAGGCCCAGG ATCCGTTCGG CGACCCGACC CGCCCCGCGC TGGACCCGGT GGAGACCGTC
CACCGGCTCG CCGAGCTCGG CGCCTACGGC GTCACCTTCC ACGACGACGA CCTCATCCCG
TTCGGCTCCG CCGACGACGA GCGCGCCAAG CACATCGCCC GCTTCCGCGA GGCCCTGGAC
GCCACCGGCC TGAAGGTGCC GATGGCGACC ACCAACCTGT TCAAGCACCC GGTCTTCAAG
GACGGCGCGT TCACCAGCAA CGACCGCGAC GTCCGCCGCT ACGCGCTGCG CAAGGTCATG
CGCAACCTGG ACCTGGCCGC CGAACTCGGC GCGGACACCT ACGTCTTCTG GGGCGGCCGC
GAGGGCTCGG AGTCCGACGC CGCCAAGGAC GTGCGCGCCG CGCTGGACCG CTACCGCGAG
GGTCTGGACA TGCTGGCCGC CTACGTCACC GACCGCGGCT ACGGCATCCG CTTCGCCCTG
GAGCCCAAGC CCAACGAGCC CCGCGGCGAC ATCCTGCTGC CGACCATCGG CCACGCCCTG
GGCTTCATCA GCACCCTGGA GCACGCCGAC ATGGTCGGGC TCAACCCCGA GGTCGGGCAC
GAGCAGATGG CCGGCCTGAA CTTCGCCCAC GGCATCGCGC AGGCGCTGTG GCAGGGCAAG
CTGTTCCACA TCGACCTCAA CGGCCAGCGC GGCATCAAGT TCGACCAGGA CCTGGTCTTC
GGCCACGGCG ACCTGCTCAA CGCCTTCTTC CTGGTGGACC TGCTGGAGAC CGGCGGCTAC
GAAGGGCCGC GGCACTTCGA CTACAAGCCC TCCCGCACCG AGGACATCAC CGGCGTCTGG
CAGTCCGCCG CCGCGAACAT GAGCACCTAC CTGCTGCTCA AGGAGCGCGC CGCGGCCTTC
CGCGCCGACC CCGAGGTCGT CGAGGCGCGC GCCGCGGCCC GCGTGGACGA CCTGGGGACG
CCGACCCTCG CCGCCGGCGA GACCTACGCC GACCTGCTCG CCGACCGCAC CGCCTTCGAG
GACTTCGACC CCGAGGAGGC CGCCGAGCGC GGTCTCGGCG CGGTCCGCCT GACCCAACTC
GCCGTCGAGC ACCTGATGGG CGCGCGGTGA
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| Protein sequence | MTVAPSPADK FTFGLWTVGW QAQDPFGDPT RPALDPVETV HRLAELGAYG VTFHDDDLIP
FGSADDERAK HIARFREALD ATGLKVPMAT TNLFKHPVFK DGAFTSNDRD VRRYALRKVM
RNLDLAAELG ADTYVFWGGR EGSESDAAKD VRAALDRYRE GLDMLAAYVT DRGYGIRFAL
EPKPNEPRGD ILLPTIGHAL GFISTLEHAD MVGLNPEVGH EQMAGLNFAH GIAQALWQGK
LFHIDLNGQR GIKFDQDLVF GHGDLLNAFF LVDLLETGGY EGPRHFDYKP SRTEDITGVW
QSAAANMSTY LLLKERAAAF RADPEVVEAR AAARVDDLGT PTLAAGETYA DLLADRTAFE
DFDPEEAAER GLGAVRLTQL AVEHLMGAR
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