| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6662 |
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| Symbol | |
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| ID | 8338026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7676386 |
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| End bp | 7677390 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644959756 |
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| Product | hopanoid biosynthesis associated radical SAM protein HpnH |
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| Protein accession | YP_003117349 |
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| Protein GI | 256395785 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.549457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATGC CGGTCCGCCA GAGCATCCGC ATCGGAAGCT ATGTCCTGGG CAACAAGCTG
CGCCGCCGTG AGAAGTTCCC CCTCCTGGTG GAGCTGGAGC CGCTGTTCGC CTGCAACCTG
GCCTGCGCCG GCTGCGGCAA GATCCAGCAC CCCGCCGACG TCCTGAAGAA GCGCATGCCC
GTCGAGCAAG CCCTCGCCGC CATGCGCGAA TGCGGCGCCC CGATGGTCTC CATCGCCGGC
GGCGAACCCC TGATGCACCC CCAGATCGGC GAACTCGTCG ACGAACTGGT GAAGATGAAG
CGCTACGTCT TCCTGTGCAC CAACGCCCTC CTCATCCCCA AGAAGCTGGA CCGCTTCAAG
CCCTCCCGCT ACTTCACCTG GGTGGTCCAC CTCGATGGCC TGCGCGAACG CCACGACGAA
TCCGTCTGCA AGGAAGGCGT CTTCGACGAA GCCGTGGCCG CCGTCCGCGA ACTCCGCCGC
CGAGGCTTCC GCGTGACGAC GAACACGACC ATCTTCGACA CCGACTCCCC CCAAGACGTC
ATCGACATCC TGGACTACCT CAACGACGAC CTCCGCGTCG ACCAAATGAT GATCAGCCCC
GGCTACGCCT ACGAAAAAGC CCCCGACCAG CAACACTTCC TCCCGGTGAA ACAAACCCGC
GAACTCTTCC ACAAAGCCTT CTCCAACGGC AACCGCGAAC GCTGGCGCCT GAACCACAGC
CCCCTCTTCC TCGACTTCCT CGAAGGCAAG ACCGACTTCC CCTGCACCGC CTGGGCCATC
CCCAGCTACT CCCTCTTCGG CTGGCAAAAA CCCTGCTACC TGATGTCCGA CGGCTACGCA
GCCACCTACA AGGAACTCCT CGAAGAAACC GACTGGGACA GCTACGGCCG CGGCAACGAC
CCCCGCTGCG CCAACTGCAT GGCCCACTGC GGCTACGAGC CCACCGCCGT CTTCGCAACA
CTGGGCTCGC TACGGGAGTC GGTGCGGGCG CTGCGGGAGA GTTAG
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| Protein sequence | MGMPVRQSIR IGSYVLGNKL RRREKFPLLV ELEPLFACNL ACAGCGKIQH PADVLKKRMP
VEQALAAMRE CGAPMVSIAG GEPLMHPQIG ELVDELVKMK RYVFLCTNAL LIPKKLDRFK
PSRYFTWVVH LDGLRERHDE SVCKEGVFDE AVAAVRELRR RGFRVTTNTT IFDTDSPQDV
IDILDYLNDD LRVDQMMISP GYAYEKAPDQ QHFLPVKQTR ELFHKAFSNG NRERWRLNHS
PLFLDFLEGK TDFPCTAWAI PSYSLFGWQK PCYLMSDGYA ATYKELLEET DWDSYGRGND
PRCANCMAHC GYEPTAVFAT LGSLRESVRA LRES
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